RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 CDKN2DP55273 166 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 SCAMP4Q969E2 229 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 LRRN3Q9H3W5 708 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 VNN3Q9NY84 501 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 TAS2R10Q9NYW0 307 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 ZNF224Q9NZL3 707 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 HCN2Q9UL51 889 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 TBX10O75333 385 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 BPIP17213 487 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 METTL2BQ6P1Q9 378 aaKnown RBP15.17■□□□□ 0.02
PTPN13-204ENST00000436978 FAM210AQ96ND0 272 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 ALG5Q9Y673 324 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 C11orf98E9PRG8 122 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 TOR1BO14657 336 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 TYROBPO43914 113 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 PENKP01210 267 aaPredicted RBP15.17■□□□□ 0.02
PTPN13-204ENST00000436978 RCAN2Q14206 197 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 MELKQ14680 651 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 CYP27C1Q4G0S4 372 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 COQ5Q5HYK3 327 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 OR5T2Q8NGG2 359 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 TMEM41AQ96HV5 264 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 SERINC2Q96SA4 455 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 FARSAQ9Y285 508 aaKnown RBP15.17■□□□□ 0.02
PTPN13-204ENST00000436978 PRAMEF26H0Y7S4 382 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 HNRNPA2B1P22626 353 aaKnown RBP15.17■□□□□ 0.02
PTPN13-204ENST00000436978 CDK10Q15131 360 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 C1orf94Q6P1W5 598 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 TCEANCQ8N8B7 351 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 GOLM1Q8NBJ4 401 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 ZNF420Q8TAQ5 688 aaPredicted RBP15.17■□□□□ 0.02
PTPN13-204ENST00000436978 NUDT15Q9NV35 164 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 PMF1-BGLAPU3KQ54 211 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 ZNF860A6NHJ4 632 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 SCO2O43819 266 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 GPR37L1O60883 481 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 SOX9P48436 509 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 ST3GAL4Q11206 333 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 RABL3Q5HYI8 236 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 GLIS1Q8NBF1 620 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 ZNF471Q9BX82 626 aaPredicted RBP15.17■□□□□ 0.02
PTPN13-204ENST00000436978 CKMT2P17540 419 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 S100A10P60903 97 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 HACD2Q6Y1H2 254 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 ZNF517Q6ZMY9 492 aaPredicted RBP15.17■□□□□ 0.02
PTPN13-204ENST00000436978 TCEAL8Q8IYN2 117 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 AMBNQ9NP70 447 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 KIAA1217Q5T5P2 1943 aa15.17■□□□□ 0.02
PTPN13-204ENST00000436978 RAB8BQ92930 207 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 CNN2Q99439 309 aaKnown RBP15.16■□□□□ 0.02
PTPN13-204ENST00000436978 FOSL2P15408 326 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 TAS2R38P59533 333 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 SERTAD2Q14140 314 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 C3orf33Q6P1S2 294 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 UTS2BQ765I0 119 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 HOXB13Q92826 284 aaPredicted RBP15.16■□□□□ 0.02
PTPN13-204ENST00000436978 NELL2Q99435 816 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 BRINP1O60477 761 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 CDC40O60508 579 aaKnown RBP eCLIP15.16■□□□□ 0.02
PTPN13-204ENST00000436978 RGS9O75916 674 aaPredicted RBP15.16■□□□□ 0.02
PTPN13-204ENST00000436978 THEGLP0DJG4 465 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 BCKDHAP12694 445 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 NSDHLQ15738 373 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 C7orf43Q8WVR3 580 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 NEDD4LQ96PU5 975 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 DUSP23Q9BVJ7 150 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 STRCQ7RTU9 1775 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 OR1E2P47887 323 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 AP2S1P53680 142 aaPredicted RBP15.16■□□□□ 0.02
PTPN13-204ENST00000436978 PPP1R3AQ16821 1122 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 WDTC1Q8N5D0 677 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 PITHD1Q9GZP4 211 aaPredicted RBP15.16■□□□□ 0.02
PTPN13-204ENST00000436978 DOCK1Q14185 1865 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 CCRL2O00421 344 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 ENTPD1P49961 510 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 SCRN2Q96FV2 425 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 CCDC106Q9BWC9 280 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 ACTRT3Q9BYD9 372 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 NOP16Q9Y3C1 178 aaKnown RBP15.16■□□□□ 0.02
PTPN13-204ENST00000436978 ALDOAP04075 364 aaKnown RBP15.16■□□□□ 0.02
PTPN13-204ENST00000436978 UGT2B10P36537 528 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 NUDT6P53370 316 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 NR0B2Q15466 257 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 CHRFAM7AQ494W8 412 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 CLLU1OSQ5K130 101 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 DCDC5Q6ZRR9 648 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 TMEM45AQ9NWC5 275 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 PLD2O14939 933 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 GSTT2P0CG29 244 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 SLC35E2BP0CK96 405 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 PRKCAP17252 672 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 DLX2Q07687 328 aaPredicted RBP15.16■□□□□ 0.02
PTPN13-204ENST00000436978 ZNF829Q3KNS6 432 aaPredicted RBP15.16■□□□□ 0.02
PTPN13-204ENST00000436978 HSD17B12Q53GQ0 312 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 FAM174AQ8TBP5 190 aa15.16■□□□□ 0.02
PTPN13-204ENST00000436978 GAS6Q14393 721 aa15.15■□□□□ 0.02
PTPN13-204ENST00000436978 TREML1Q86YW5 311 aa15.15■□□□□ 0.02
PTPN13-204ENST00000436978 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.15■□□□□ 0.02
PTPN13-204ENST00000436978 KCNK13Q9HB14 408 aa15.15■□□□□ 0.02
PTPN13-204ENST00000436978 HSFX1Q9UBD0 423 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms