RNA–Protein interactions for RNA: ENST00000435759.6

PTPN7-203, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-203ENST00000435759 LIME1Q9H400 295 aa12.55□□□□□ -0.4
PTPN7-203ENST00000435759 EXO5Q9H790 373 aa12.55□□□□□ -0.4
PTPN7-203ENST00000435759 ZNF358Q9NW07 568 aa12.55□□□□□ -0.4
PTPN7-203ENST00000435759 MS4A12Q9NXJ0 267 aa12.55□□□□□ -0.4
PTPN7-203ENST00000435759 CNOT11Q9UKZ1 510 aaKnown RBP12.55□□□□□ -0.4
PTPN7-203ENST00000435759 INTS1Q8N201 2190 aaKnown RBP12.54□□□□□ -0.4
PTPN7-203ENST00000435759 ITPR3Q14573 2671 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 IQANK1A0A1B0GTG1 560 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 H0YIV9 168 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 OR7A17O14581 309 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 HCN1O60741 890 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 ACSL3O95573 720 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 CT62P0C5K7 136 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 FAM58BPP0C7Q3 252 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 SERPINB1P30740 379 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 TLX1P31314 330 aaPredicted RBP12.54□□□□□ -0.4
PTPN7-203ENST00000435759 SSTR4P31391 388 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 RIPPLY3P57055 190 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 KCNJ2P63252 427 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 SLC7A5Q01650 507 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 SETDB1Q15047 1291 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 C1orf185Q5T7R7 199 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 WLSQ5T9L3 541 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 GOLGA7Q7Z5G4 137 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 ST13P4Q8IZP2 240 aaPredicted RBP12.54□□□□□ -0.4
PTPN7-203ENST00000435759 PLD6Q8N2A8 252 aaKnown RBP12.54□□□□□ -0.4
PTPN7-203ENST00000435759 SLC15A4Q8N697 577 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 FAM13CQ8NE31 585 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 RHEBL1Q8TAI7 183 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 WDR20Q8TBZ3 569 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 RIT1Q92963 219 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 SARAFQ96BY9 339 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 CDK15Q96Q40 435 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 DDX31Q9H8H2 851 aaKnown RBP12.54□□□□□ -0.4
PTPN7-203ENST00000435759 IPPKQ9H8X2 491 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 ACTR8Q9H981 624 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 KCNN3Q9UGI6 736 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 ADGRE2Q9UHX3 823 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 TSC22D4Q9Y3Q8 395 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 L3MBTL1Q9Y468 752 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 ANGPTL3Q9Y5C1 460 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 PCDHGA11Q9Y5H2 935 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 EML6Q6ZMW3 1958 aa12.54□□□□□ -0.4
PTPN7-203ENST00000435759 NIPBLQ6KC79 2804 aaeCLIP12.53□□□□□ -0.4
PTPN7-203ENST00000435759 ESYT3A0FGR9 886 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 FIGNL2A6NMB9 653 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 FOXO6A8MYZ6 492 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 OR10H2O60403 315 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 TRIM3O75382 744 aaPredicted RBP12.53□□□□□ -0.4
PTPN7-203ENST00000435759 AIFM1O95831 613 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 GFAPP14136 432 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 DNAJA1P31689 397 aaKnown RBP12.53□□□□□ -0.4
PTPN7-203ENST00000435759 FBXW4P57775 412 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 MYBPHQ13203 477 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 BIKQ13323 160 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 GTF2H2Q13888 395 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 EBPQ15125 230 aaKnown RBP12.53□□□□□ -0.4
PTPN7-203ENST00000435759 PCBP2Q15366 365 aaKnown RBP eCLIP12.53□□□□□ -0.4
PTPN7-203ENST00000435759 CES4AQ5XG92 561 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 DESI1Q6ICB0 168 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 GTF2H2CQ6P1K8 395 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 ARSKQ6UWY0 536 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 RNF111Q6ZNA4 994 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 TMEM200AQ86VY9 491 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 ZZZ3Q8IYH5 903 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 ULK2Q8IYT8 1036 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 LRRC25Q8N386 305 aaPredicted RBP12.53□□□□□ -0.4
PTPN7-203ENST00000435759 FBXW8Q8N3Y1 598 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 ZNF441Q8N8Z8 693 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 L3MBTL4Q8NA19 623 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 SLC22A8Q8TCC7 542 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 ZNF703Q9H7S9 590 aaPredicted RBP12.53□□□□□ -0.4
PTPN7-203ENST00000435759 NOL11Q9H8H0 719 aaKnown RBP12.53□□□□□ -0.4
PTPN7-203ENST00000435759 ACKR4Q9NPB9 350 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 SNX15Q9NRS6 342 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 PHF11Q9UIL8 331 aa12.53□□□□□ -0.4
PTPN7-203ENST00000435759 UTP11Q9Y3A2 253 aaKnown RBP12.53□□□□□ -0.4
PTPN7-203ENST00000435759 HCFC1P51610 2035 aa12.52□□□□□ -0.4
PTPN7-203ENST00000435759 A0A087X1B8 175 aa12.52□□□□□ -0.41
PTPN7-203ENST00000435759 A0A096LPK6 155 aa12.52□□□□□ -0.41
PTPN7-203ENST00000435759 SYCE1LA8MT33 242 aa12.52□□□□□ -0.41
PTPN7-203ENST00000435759 WDR1O75083 606 aa12.52□□□□□ -0.41
PTPN7-203ENST00000435759 KLHL2O95198 593 aa12.52□□□□□ -0.41
PTPN7-203ENST00000435759 SLC35E2P0CK97 266 aa12.52□□□□□ -0.41
PTPN7-203ENST00000435759 SERPINB3P29508 390 aa12.52□□□□□ -0.41
PTPN7-203ENST00000435759 STX2P32856 288 aa12.52□□□□□ -0.41
PTPN7-203ENST00000435759 ART1P52961 327 aa12.52□□□□□ -0.41
PTPN7-203ENST00000435759 IST1P53990 364 aa12.52□□□□□ -0.41
PTPN7-203ENST00000435759 ALDH18A1P54886 795 aaKnown RBP12.52□□□□□ -0.41
PTPN7-203ENST00000435759 PLIN5Q00G26 463 aa12.52□□□□□ -0.41
PTPN7-203ENST00000435759 CAV1Q03135 178 aa12.52□□□□□ -0.41
PTPN7-203ENST00000435759 CUL3Q13618 768 aa12.52□□□□□ -0.41
PTPN7-203ENST00000435759 ACAP2Q15057 778 aa12.52□□□□□ -0.41
PTPN7-203ENST00000435759 NTRK2Q16620 822 aa12.52□□□□□ -0.41
PTPN7-203ENST00000435759 FAM83EQ2M2I3 478 aa12.52□□□□□ -0.41
PTPN7-203ENST00000435759 SPRED3Q2MJR0 410 aa12.52□□□□□ -0.41
PTPN7-203ENST00000435759 FNDC7Q5VTL7 733 aa12.52□□□□□ -0.41
PTPN7-203ENST00000435759 POMZP3Q6PJE2 187 aa12.52□□□□□ -0.41
PTPN7-203ENST00000435759 CYP20A1Q6UW02 462 aa12.52□□□□□ -0.41
PTPN7-203ENST00000435759 RPS27LQ71UM5 84 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms