RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 DPH7Q9BTV6 452 aa17.6■□□□□ 0.41
CLK1-205ENST00000434813 PRO3102Q9H379 93 aa17.6■□□□□ 0.41
CLK1-205ENST00000434813 OSGEPL1Q9H4B0 414 aa17.6■□□□□ 0.41
CLK1-205ENST00000434813 GLIPR2Q9H4G4 154 aa17.6■□□□□ 0.41
CLK1-205ENST00000434813 IMP3Q9NV31 184 aaKnown RBP17.6■□□□□ 0.41
CLK1-205ENST00000434813 CLN6Q9NWW5 311 aa17.6■□□□□ 0.41
CLK1-205ENST00000434813 REV1Q9UBZ9 1251 aa17.6■□□□□ 0.41
CLK1-205ENST00000434813 GPC6Q9Y625 555 aaPredicted RBP17.6■□□□□ 0.41
CLK1-205ENST00000434813 CKAP5Q14008 2032 aa17.6■□□□□ 0.41
CLK1-205ENST00000434813 XIRP2A4UGR9 3374 aa17.6■□□□□ 0.41
CLK1-205ENST00000434813 NUMA1Q14980 2115 aa17.6■□□□□ 0.41
CLK1-205ENST00000434813 SLC28A2O43868 658 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 H1F0P07305 194 aaKnown RBP17.59■□□□□ 0.41
CLK1-205ENST00000434813 CD97P48960 835 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 LIMK1P53667 647 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 IFITM3Q01628 133 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 FGL2Q14314 439 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 SEC23BQ15437 767 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 ZNF404Q494X3 552 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 ARMCX4Q5H9R4 360 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 DCST1Q5T197 706 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 ZNF793Q6ZN11 406 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 HDDC3Q8N4P3 179 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 KBTBD8Q8NFY9 601 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 FAIM2Q9BWQ8 316 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 MMP27Q9H306 513 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 SEMA3GQ9NS98 782 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 SEC14L3Q9UDX4 400 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 ZFR2Q9UPR6 939 aaKnown RBP17.59■□□□□ 0.41
CLK1-205ENST00000434813 PCDHGA3Q9Y5H0 932 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 PRAMEF27A3QJZ7 478 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 CNOT3O75175 753 aaKnown RBP17.59■□□□□ 0.41
CLK1-205ENST00000434813 SERPINB7O75635 380 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 GRK5P34947 590 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 WASP42768 502 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 MAGEA8P43361 318 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 SLC15A1P46059 708 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 RGS6P49758 472 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 ILKQ13418 452 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 ZIC1Q15915 447 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 C2orf27AQ580R0 203 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 TOR1AIP1Q5JTV8 583 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 DEF8Q6ZN54 512 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 OR4D11Q8NGI4 311 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 UCN3Q969E3 161 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 FUZQ9BT04 418 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 OR51I1Q9H343 314 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 XKR8Q9H6D3 395 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 SLC35C2Q9NQQ7 365 aa17.59■□□□□ 0.41
CLK1-205ENST00000434813 CCDC59Q9P031 241 aaKnown RBP17.59■□□□□ 0.41
CLK1-205ENST00000434813 COLQQ9Y215 455 aaPredicted RBP17.59■□□□□ 0.41
CLK1-205ENST00000434813 HEATR5BQ9P2D3 2071 aa17.58■□□□□ 0.41
CLK1-205ENST00000434813 SZT2Q5T011 3432 aa17.58■□□□□ 0.41
CLK1-205ENST00000434813 A0A0G2JN53 185 aa17.58■□□□□ 0.4
CLK1-205ENST00000434813 A0A1W2PP55 124 aa17.58■□□□□ 0.4
CLK1-205ENST00000434813 PRR19A6NJB7 356 aa17.58■□□□□ 0.4
CLK1-205ENST00000434813 BOLA2-SMG1P6H3BVE0 249 aa17.58■□□□□ 0.4
CLK1-205ENST00000434813 TLR4O00206 839 aa17.58■□□□□ 0.4
CLK1-205ENST00000434813 PPM1DO15297 605 aa17.58■□□□□ 0.4
CLK1-205ENST00000434813 SERPIND1P05546 499 aa17.58■□□□□ 0.4
CLK1-205ENST00000434813 OR12D1P0DN82 309 aa17.58■□□□□ 0.4
CLK1-205ENST00000434813 CD72P21854 359 aa17.58■□□□□ 0.4
CLK1-205ENST00000434813 CDH3P22223 829 aa17.58■□□□□ 0.4
CLK1-205ENST00000434813 BCL6P41182 706 aa17.58■□□□□ 0.4
CLK1-205ENST00000434813 UGT2B15P54855 530 aa17.58■□□□□ 0.4
CLK1-205ENST00000434813 SMIM11AP58511 58 aa17.58■□□□□ 0.4
CLK1-205ENST00000434813 SNRPGP62308 76 aaKnown RBP17.58■□□□□ 0.4
CLK1-205ENST00000434813 LEXMQ3ZCV2 418 aa17.58■□□□□ 0.4
CLK1-205ENST00000434813 PERM1Q5SV97 790 aa17.58■□□□□ 0.4
CLK1-205ENST00000434813 SLX4IPQ5VYV7 408 aa17.58■□□□□ 0.4
CLK1-205ENST00000434813 TMEM64Q6YI46 380 aa17.58■□□□□ 0.4
CLK1-205ENST00000434813 VANGL1Q8TAA9 524 aaPredicted RBP17.58■□□□□ 0.4
CLK1-205ENST00000434813 FZD3Q9NPG1 666 aa17.58■□□□□ 0.4
CLK1-205ENST00000434813 GIN1Q9NXP7 522 aa17.58■□□□□ 0.4
CLK1-205ENST00000434813 KCNK6Q9Y257 313 aa17.58■□□□□ 0.4
CLK1-205ENST00000434813 CCDC88CQ9P219 2028 aa17.57■□□□□ 0.4
CLK1-205ENST00000434813 OR10H3O60404 316 aa17.57■□□□□ 0.4
CLK1-205ENST00000434813 SLITRK5O94991 958 aa17.57■□□□□ 0.4
CLK1-205ENST00000434813 APODP05090 189 aa17.57■□□□□ 0.4
CLK1-205ENST00000434813 POU1F1P28069 291 aa17.57■□□□□ 0.4
CLK1-205ENST00000434813 CD40LGP29965 261 aa17.57■□□□□ 0.4
CLK1-205ENST00000434813 PPP2R1BP30154 601 aa17.57■□□□□ 0.4
CLK1-205ENST00000434813 NTSP30990 170 aa17.57■□□□□ 0.4
CLK1-205ENST00000434813 GPC1P35052 558 aa17.57■□□□□ 0.4
CLK1-205ENST00000434813 KHKP50053 298 aa17.57■□□□□ 0.4
CLK1-205ENST00000434813 RELAQ04206 551 aa17.57■□□□□ 0.4
CLK1-205ENST00000434813 SYPL1Q16563 259 aa17.57■□□□□ 0.4
CLK1-205ENST00000434813 TMEM201Q5SNT2 666 aa17.57■□□□□ 0.4
CLK1-205ENST00000434813 PLAG1Q6DJT9 500 aa17.57■□□□□ 0.4
CLK1-205ENST00000434813 RBM45Q8IUH3 476 aaKnown RBP17.57■□□□□ 0.4
CLK1-205ENST00000434813 TBC1D19Q8N5T2 526 aa17.57■□□□□ 0.4
CLK1-205ENST00000434813 AMER2Q8N7J2 671 aa17.57■□□□□ 0.4
CLK1-205ENST00000434813 MYADMQ96S97 322 aa17.57■□□□□ 0.4
CLK1-205ENST00000434813 KXD1Q9BQD3 176 aa17.57■□□□□ 0.4
CLK1-205ENST00000434813 NXF2Q9GZY0 626 aaKnown RBP17.57■□□□□ 0.4
CLK1-205ENST00000434813 RMI1Q9H9A7 625 aa17.57■□□□□ 0.4
CLK1-205ENST00000434813 C11orf16Q9NQ32 467 aa17.57■□□□□ 0.4
CLK1-205ENST00000434813 ZCCHC3Q9NUD5 404 aaKnown RBP17.57■□□□□ 0.4
CLK1-205ENST00000434813 TAS2R16Q9NYV7 291 aa17.57■□□□□ 0.4
CLK1-205ENST00000434813 DOLKQ9UPQ8 538 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms