RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 CFDP00746 253 aaPredicted RBP10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 FAM157BP0CG42 384 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 ANXA3P12429 323 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 BDKRB1P46663 353 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 ATP12AP54707 1039 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 NAE1Q13564 534 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 LRRC73Q5JTD7 316 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 CXorf57Q6NSI4 855 aaKnown RBP10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 CFAP77Q6ZQR2 320 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 RNF165Q6ZSG1 346 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 SZRD1Q7Z422 152 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 ZNF366Q8N895 744 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 L3MBTL4Q8NA19 623 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 ZC3HAV1LQ96H79 300 aaKnown RBP10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 ERVMER34-1Q9H9K5 563 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 BTNL2Q9UIR0 455 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 PADI3Q9ULW8 664 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 PRMT3O60678 531 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 GJB5O95377 273 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 ELK1P19419 428 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 HNF1BP35680 557 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 ATP6V1E1P36543 226 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 TALDO1P37837 337 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 SNRPGP62308 76 aaKnown RBP10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 LSM11P83369 360 aaKnown RBP eCLIP10.98□□□□□ -0.656e-13■□□□□ 8.6
HMGCS1-202ENST00000433297 CRYZQ08257 329 aaKnown RBP10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 PUM1Q14671 1186 aaKnown RBP eCLIP10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 RAET1GQ6H3X3 334 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 LIPIQ6XZB0 460 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 RFLNAQ6ZTI6 216 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 KANSL1Q7Z3B3 1105 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 PIAS4Q8N2W9 510 aaPredicted RBP10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 LMNTD1Q8N9Z9 388 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 GBF1Q92538 1859 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 RAB8BQ92930 207 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 CREB3L1Q96BA8 519 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 HHIPQ96QV1 700 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 ATF6BQ99941 703 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 AP5M1Q9H0R1 490 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 ZFP64Q9NPA5 681 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 SEMA3GQ9NS98 782 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 REV1Q9UBZ9 1251 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 TRPV2Q9Y5S1 764 aa10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 POLR2AP24928 1970 aaKnown RBP10.98□□□□□ -0.65
HMGCS1-202ENST00000433297 LOC285556D6RIA3 1793 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 SSNA1O43805 119 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 B4GALT3O60512 393 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 BCHEP06276 602 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 TPOP07202 933 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 DNASE1P24855 282 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 MVDP53602 400 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 PIN1Q13526 163 aaPredicted RBP10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 NTRK2Q16620 822 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 MZT2AQ6P582 158 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 NXPE1Q8N323 547 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 LHFPL5Q8TAF8 219 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 MRPS31Q92665 395 aaKnown RBP10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 UCN3Q969E3 161 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 THAP7Q9BT49 309 aaPredicted RBP10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 HTATIP2Q9BUP3 242 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 NLNQ9BYT8 704 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 ENAMQ9NRM1 1142 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 CD84Q9UIB8 345 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 ANGPT4Q9Y264 503 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 CCDC88CQ9P219 2028 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 ANKDD1BA6NHY2 528 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 NME6O75414 186 aaPredicted RBP10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 CLDN11O75508 207 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 WDR5P61964 334 aaKnown RBP10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 RPS13P62277 151 aaKnown RBP10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 ILKQ13418 452 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 LGALSLQ3ZCW2 172 aaPredicted RBP10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 ACSM5Q6NUN0 579 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 DDX53Q86TM3 631 aaKnown RBP10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 OR52N2Q8NGI0 321 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 RNFT2Q96EX2 444 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 CHIAQ9BZP6 476 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 MS4A7Q9GZW8 240 aaPredicted RBP10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 C1GALT1Q9NS00 363 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 SHISA3A0PJX4 238 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 DVL2O14641 736 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 CH25HO95992 272 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 ADAP00813 363 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 ATP5C1P36542 298 aaKnown RBP10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 THPOP40225 353 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 RAE1P78406 368 aaKnown RBP10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 DUSP4Q13115 394 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 SYT14P1Q58G82 188 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 CLEC12AQ5QGZ9 265 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 MTFR2Q6P444 385 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 TMEM81Q6P7N7 255 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 SERPINA13PQ6UXR4 307 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 LSRQ86X29 649 aaPredicted RBP10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 GPR26Q8NDV2 337 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 RBPMSQ93062 196 aaKnown RBP10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 C12orf66Q96MD2 445 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 WRAP53Q9BUR4 548 aaKnown RBP10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 SPRTNQ9H040 489 aaPredicted RBP10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 PPA2Q9H2U2 334 aa10.97□□□□□ -0.65
HMGCS1-202ENST00000433297 PIKFYVEQ9Y2I7 2098 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms