RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 GAL3ST4Q96RP7 486 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 RBBP8Q99708 897 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 SH3GL2Q99962 352 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 WWTR1Q9GZV5 400 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 OR51B5Q9H339 312 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 PROK2Q9HC23 129 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 NUDT4Q9NZJ9 180 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 OPTCQ9UBM4 332 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 ZNF629Q9UEG4 869 aaPredicted RBP13.68□□□□□ -0.22
PRKDC-203ENST00000432581 CNOT11Q9UKZ1 510 aaKnown RBP13.68□□□□□ -0.22
PRKDC-203ENST00000432581 PLEKHA6Q9Y2H5 1048 aa13.68□□□□□ -0.22
PRKDC-203ENST00000432581 C15orf38-AP3S2A0A0A6YYH1 394 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 CAPN14A8MX76 684 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 CCDC188H7C350 402 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 K7EPI3 171 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 HRKO00198 91 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 TP53I11O14683 189 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 OR10H2O60403 315 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 PIAS1O75925 651 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 C1QAP02745 245 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 FOSL1P15407 271 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 GDF1P27539 372 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 CEACAM8P31997 349 aaPredicted RBP13.67□□□□□ -0.22
PRKDC-203ENST00000432581 TIMP3P35625 211 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 GP5P40197 560 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 PIK3CBP42338 1070 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 TRPC1P48995 793 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 DGKQP52824 942 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 RAB10P61026 200 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 HERVK_113P63132 956 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 ERVK-8P63133 956 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 FOXD4Q12950 439 aaPredicted RBP13.67□□□□□ -0.22
PRKDC-203ENST00000432581 DUSP8Q13202 625 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 ZNF267Q14586 743 aaPredicted RBP13.67□□□□□ -0.22
PRKDC-203ENST00000432581 EBPQ15125 230 aaKnown RBP13.67□□□□□ -0.22
PRKDC-203ENST00000432581 TMEM198Q66K66 360 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 GRHL2Q6ISB3 625 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 DGAT2L6Q6ZPD8 337 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 CYS1Q717R9 158 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 PM20D2Q8IYS1 436 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 UBTD2Q8WUN7 234 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 RIT1Q92963 219 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 SORBS1Q9BX66 1292 aaKnown RBP13.67□□□□□ -0.22
PRKDC-203ENST00000432581 ERVK-6Q9BXR3 956 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 ERVK-19Q9WJR5 959 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 IKBKGQ9Y6K9 419 aa13.67□□□□□ -0.22
PRKDC-203ENST00000432581 CXorf49A8MYA2 514 aaPredicted RBP13.66□□□□□ -0.22
PRKDC-203ENST00000432581 PLPP1O14494 284 aa13.66□□□□□ -0.22
PRKDC-203ENST00000432581 TRIM3O75382 744 aaPredicted RBP13.66□□□□□ -0.22
PRKDC-203ENST00000432581 GPR75O95800 540 aa13.66□□□□□ -0.22
PRKDC-203ENST00000432581 IL2RAP01589 272 aa13.66□□□□□ -0.22
PRKDC-203ENST00000432581 GALNSP34059 522 aa13.66□□□□□ -0.22
PRKDC-203ENST00000432581 RPL21P46778 160 aaKnown RBP13.66□□□□□ -0.22
PRKDC-203ENST00000432581 SLC37A1P57057 533 aa13.66□□□□□ -0.22
PRKDC-203ENST00000432581 PHEXP78562 749 aa13.66□□□□□ -0.22
PRKDC-203ENST00000432581 CRYZQ08257 329 aaKnown RBP13.66□□□□□ -0.22
PRKDC-203ENST00000432581 DDX39BQ13838 428 aaKnown RBP13.66□□□□□ -0.22
PRKDC-203ENST00000432581 DAZAP2Q15038 168 aaPredicted RBP13.66□□□□□ -0.22
PRKDC-203ENST00000432581 RPS6KA2Q15349 733 aa13.66□□□□□ -0.22
PRKDC-203ENST00000432581 C18orf63Q68DL7 685 aa13.66□□□□□ -0.22
PRKDC-203ENST00000432581 PAMR1Q6UXH9 720 aa13.66□□□□□ -0.22
PRKDC-203ENST00000432581 KIF18BQ86Y91 864 aa13.66□□□□□ -0.22
PRKDC-203ENST00000432581 CREG2Q8IUH2 290 aa13.66□□□□□ -0.22
PRKDC-203ENST00000432581 NAXEQ8NCW5 288 aa13.66□□□□□ -0.22
PRKDC-203ENST00000432581 TNIP2Q8NFZ5 429 aa13.66□□□□□ -0.22
PRKDC-203ENST00000432581 HUS1BQ8NHY5 278 aa13.66□□□□□ -0.22
PRKDC-203ENST00000432581 DIO2Q92813 273 aa13.66□□□□□ -0.22
PRKDC-203ENST00000432581 HSPBAP1Q96EW2 488 aa13.66□□□□□ -0.22
PRKDC-203ENST00000432581 ALG9Q9H6U8 611 aa13.66□□□□□ -0.22
PRKDC-203ENST00000432581 NMRAL1Q9HBL8 299 aa13.66□□□□□ -0.22
PRKDC-203ENST00000432581 DMRT3Q9NQL9 472 aa13.66□□□□□ -0.22
PRKDC-203ENST00000432581 DLL4Q9NR61 685 aa13.66□□□□□ -0.22
PRKDC-203ENST00000432581 LYARQ9NX58 379 aaKnown RBP13.66□□□□□ -0.22
PRKDC-203ENST00000432581 CBLCQ9ULV8 474 aa13.66□□□□□ -0.22
PRKDC-203ENST00000432581 TSC22D4Q9Y3Q8 395 aa13.66□□□□□ -0.22
PRKDC-203ENST00000432581 FAM159BA6NKW6 160 aa13.65□□□□□ -0.22
PRKDC-203ENST00000432581 SUPT3HB4E1H0 165 aa13.65□□□□□ -0.22
PRKDC-203ENST00000432581 EIF3HO15372 352 aaKnown RBP eCLIP13.65□□□□□ -0.22
PRKDC-203ENST00000432581 KERAO60938 352 aa13.65□□□□□ -0.22
PRKDC-203ENST00000432581 SUPT3HO75486 399 aa13.65□□□□□ -0.22
PRKDC-203ENST00000432581 SNX4O95219 450 aa13.65□□□□□ -0.22
PRKDC-203ENST00000432581 GOSR1O95249 250 aa13.65□□□□□ -0.22
PRKDC-203ENST00000432581 EPB42P16452 691 aa13.65□□□□□ -0.22
PRKDC-203ENST00000432581 PTX3P26022 381 aaPredicted RBP13.65□□□□□ -0.22
PRKDC-203ENST00000432581 SSTR1P30872 391 aa13.65□□□□□ -0.22
PRKDC-203ENST00000432581 SPRP35270 261 aaPredicted RBP13.65□□□□□ -0.22
PRKDC-203ENST00000432581 TMED10P49755 219 aaKnown RBP13.65□□□□□ -0.22
PRKDC-203ENST00000432581 HNRNPH2P55795 449 aaKnown RBP13.65□□□□□ -0.22
PRKDC-203ENST00000432581 FBXW10Q5XX13 1052 aa13.65□□□□□ -0.22
PRKDC-203ENST00000432581 RAPH1Q70E73 1250 aa13.65□□□□□ -0.22
PRKDC-203ENST00000432581 ISCA2Q86U28 154 aa13.65□□□□□ -0.22
PRKDC-203ENST00000432581 ZNF441Q8N8Z8 693 aa13.65□□□□□ -0.22
PRKDC-203ENST00000432581 TP53INP1Q96A56 240 aa13.65□□□□□ -0.22
PRKDC-203ENST00000432581 SECISBP2Q96T21 854 aaKnown RBP13.65□□□□□ -0.22
PRKDC-203ENST00000432581 TIMP4Q99727 224 aa13.65□□□□□ -0.22
PRKDC-203ENST00000432581 PRDM14Q9GZV8 571 aa13.65□□□□□ -0.22
PRKDC-203ENST00000432581 WDR41Q9HAD4 459 aa13.65□□□□□ -0.22
PRKDC-203ENST00000432581 SNX15Q9NRS6 342 aa13.65□□□□□ -0.22
PRKDC-203ENST00000432581 SNX24Q9Y343 169 aa13.65□□□□□ -0.22
PRKDC-203ENST00000432581 PCDHGA11Q9Y5H2 935 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms