RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 THAP11Q96EK4 314 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 ZNF354BQ96LW1 612 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 ZNF681Q96N22 645 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 ALPK1Q96QP1 1244 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 TREX2Q9BQ50 279 aaPredicted RBP13.18□□□□□ -0.3
HOXC4-202ENST00000430889 WFDC6Q9BQY6 131 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 NMNAT1Q9HAN9 279 aaPredicted RBP13.18□□□□□ -0.3
HOXC4-202ENST00000430889 P2RX2Q9UBL9 471 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 FAM32AQ9Y421 112 aaKnown RBP13.18□□□□□ -0.3
HOXC4-202ENST00000430889 ARHGEF17Q96PE2 2063 aaPredicted RBP13.18□□□□□ -0.3
HOXC4-202ENST00000430889 TRBV4-1A0A0J9YWV2 114 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 SHISA7A6NL88 538 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 BTN3A3O00478 584 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 TNFRSF10CO14798 259 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 PROM1O43490 865 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 FOXD2O60548 495 aaPredicted RBP13.18□□□□□ -0.3
HOXC4-202ENST00000430889 EPPINO95925 133 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 BCL10O95999 233 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 OR12D1P0DN82 309 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 NDUFV2P19404 249 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 DRD1P21728 446 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 CERS1P27544 350 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 NTSP30990 170 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 ACSL1P33121 698 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 TGFBR2P37173 567 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 SLC19A1P41440 591 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 NCBP2P52298 156 aaKnown RBP eCLIP13.18□□□□□ -0.3
HOXC4-202ENST00000430889 GANABQ14697 944 aaKnown RBP13.18□□□□□ -0.3
HOXC4-202ENST00000430889 GPR19Q15760 415 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 AP1ARQ63HQ0 302 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 ENPP7Q6UWV6 458 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 TMEM92Q6UXU6 159 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 LACC1Q8IV20 430 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 TBC1D19Q8N5T2 526 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 AQP11Q8NBQ7 271 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 SRFBP1Q8NEF9 429 aaKnown RBP13.18□□□□□ -0.3
HOXC4-202ENST00000430889 CCL4L1Q8NHW4 92 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 FAM81AQ8TBF8 368 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 NT5CQ8TCD5 201 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 MAPKAP1Q9BPZ7 522 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 ZCCHC3Q9NUD5 404 aaKnown RBP13.18□□□□□ -0.3
HOXC4-202ENST00000430889 REV1Q9UBZ9 1251 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 WARS2Q9UGM6 360 aaKnown RBP13.18□□□□□ -0.3
HOXC4-202ENST00000430889 NDOR1Q9UHB4 597 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 KLHL20Q9Y2M5 609 aa13.18□□□□□ -0.3
HOXC4-202ENST00000430889 A0A1W2PS29 197 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 TNFSF14O43557 240 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 MAN1A2O60476 641 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 GUCY1B2O75343 617 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 ADAP00813 363 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 GASTP01350 101 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 CHRM4P08173 479 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 SMIM10L1P0DMW3 83 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 HNRNPA2B1P22626 353 aaKnown RBP13.17□□□□□ -0.3
HOXC4-202ENST00000430889 ELAVL4P26378 380 aaKnown RBP13.17□□□□□ -0.3
HOXC4-202ENST00000430889 CALRP27797 417 aaKnown RBP13.17□□□□□ -0.3
HOXC4-202ENST00000430889 KHKP50053 298 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 SNRPNP63162 240 aaKnown RBP13.17□□□□□ -0.3
HOXC4-202ENST00000430889 COL19A1Q14993 1142 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 SEC23BQ15437 767 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 TBCEQ15813 527 aaPredicted RBP13.17□□□□□ -0.3
HOXC4-202ENST00000430889 MOGQ16653 247 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 ZNF750Q32MQ0 723 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 C18orf63Q68DL7 685 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 AHSA2Q719I0 299 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 NRROSQ86YC3 692 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 CROCCP3Q8IVE0 287 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 OR5D16Q8NGK9 328 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 PHF10Q8WUB8 498 aaKnown RBP13.17□□□□□ -0.3
HOXC4-202ENST00000430889 RASSF5Q8WWW0 418 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 LCN9Q8WX39 176 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 PROX1Q92786 737 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 GGHQ92820 318 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 TM4SF19Q96DZ7 209 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 SMIM10Q96HG1 83 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 C10orf90Q96M02 699 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 ZNF607Q96SK3 696 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 GDF15Q99988 308 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 RHCGQ9UBD6 479 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 NCKAP1Q9Y2A7 1128 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 PIAS3Q9Y6X2 628 aa13.17□□□□□ -0.3
HOXC4-202ENST00000430889 XIRP2A4UGR9 3374 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 GLOD5A6NK44 160 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 CLCA1A8K7I4 914 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 FAM227AF5H4B4 570 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 SLC28A2O43868 658 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 CLPXO76031 633 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 OXSR1O95747 527 aaPredicted RBP13.16□□□□□ -0.3
HOXC4-202ENST00000430889 FADS2O95864 444 aaKnown RBP13.16□□□□□ -0.3
HOXC4-202ENST00000430889 CDK1P06493 297 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 CHMP24386 653 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 MAN2A2P49641 1150 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 STXBP1P61764 594 aaKnown RBP13.16□□□□□ -0.3
HOXC4-202ENST00000430889 RPS15AP62244 130 aaKnown RBP13.16□□□□□ -0.3
HOXC4-202ENST00000430889 IRF3Q14653 427 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 PRAMEF8Q5VWM4 474 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 PRAMEF7Q5VXH5 474 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 ARHGAP22Q7Z5H3 698 aa13.16□□□□□ -0.3
HOXC4-202ENST00000430889 RBM45Q8IUH3 476 aaKnown RBP13.16□□□□□ -0.3
HOXC4-202ENST00000430889 DEPDC4Q8N2C3 294 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms