RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 C3orf14Q9HBI5 128 aa13.48□□□□□ -0.25
CALD1-207ENST00000430085 PRDM9Q9NQV7 894 aa13.48□□□□□ -0.25
CALD1-207ENST00000430085 IFT80Q9P2H3 777 aaPredicted RBP13.48□□□□□ -0.25
CALD1-207ENST00000430085 P2RX2Q9UBL9 471 aa13.48□□□□□ -0.25
CALD1-207ENST00000430085 RAB23Q9ULC3 237 aa13.48□□□□□ -0.25
CALD1-207ENST00000430085 MAGED1Q9Y5V3 778 aaPredicted RBP13.48□□□□□ -0.25
CALD1-207ENST00000430085 SCN3AQ9NY46 2000 aa13.48□□□□□ -0.25
CALD1-207ENST00000430085 A0A1B0GTW7 788 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 GALR3O60755 368 aaPredicted RBP13.47□□□□□ -0.25
CALD1-207ENST00000430085 SNAP29O95721 258 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 ALBP02768 609 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 ALPLP05186 524 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 ALDH4A1P30038 563 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 MAGEA8P43361 318 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 CLCN2P51788 898 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 XKP51811 444 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 EPHA4P54764 986 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 PCBP3P57721 371 aaKnown RBP13.47□□□□□ -0.25
CALD1-207ENST00000430085 SIM1P81133 766 aaPredicted RBP13.47□□□□□ -0.25
CALD1-207ENST00000430085 PPP1R8Q12972 351 aaKnown RBP13.47□□□□□ -0.25
CALD1-207ENST00000430085 ANGPT1Q15389 498 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 GPR19Q15760 415 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 IFI44LQ53G44 452 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 PRSS41Q7RTY9 318 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 TBC1D20Q96BZ9 403 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 TMEM19Q96HH6 336 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 AHCYL2Q96HN2 611 aaKnown RBP13.47□□□□□ -0.25
CALD1-207ENST00000430085 C10orf90Q96M02 699 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 RUBCNLQ9H714 662 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 ANKHQ9HCJ1 492 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 LRIT1Q9P2V4 623 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 CLCA2Q9UQC9 943 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 PADI2Q9Y2J8 665 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 KNL1Q8NG31 2342 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 A0A1W2PS29 197 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 EMC8O43402 210 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 GALR2O43603 387 aaPredicted RBP13.47□□□□□ -0.25
CALD1-207ENST00000430085 HCRTR1O43613 425 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 SLC28A2O43868 658 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 SRPX2O60687 465 aaPredicted RBP13.47□□□□□ -0.25
CALD1-207ENST00000430085 PDE9AO76083 593 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 DIRAS1O95057 198 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 TNFAIP8O95379 198 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 TFPTP0C1Z6 253 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 OR12D1P0DN82 309 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 PPP2R1BP30154 601 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 CAPGP40121 348 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 MC3RP41968 323 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 MLLT3P42568 568 aaPredicted RBP13.47□□□□□ -0.25
CALD1-207ENST00000430085 ARRB1P49407 418 aaPredicted RBP13.47□□□□□ -0.25
CALD1-207ENST00000430085 ITGA1P56199 1179 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 SLC36A3Q495N2 470 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 C6orf132Q5T0Z8 1188 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 SHQ1Q6PI26 577 aaKnown RBP13.47□□□□□ -0.25
CALD1-207ENST00000430085 WDR5BQ86VZ2 330 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 ST13P4Q8IZP2 240 aaPredicted RBP13.47□□□□□ -0.25
CALD1-207ENST00000430085 HS3ST5Q8IZT8 346 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 DNAJC22Q8N4W6 341 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 ARL10Q8N8L6 244 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 OR5D16Q8NGK9 328 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 XAGE5Q8WWM1 108 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 NCSTNQ92542 709 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 COL26A1Q96A83 441 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 ELP4Q96EB1 424 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 ZDHHC12Q96GR4 267 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 OSBPL10Q9BXB5 764 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 SERHL2Q9H4I8 314 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 REEP1Q9H902 201 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 SOHLH2Q9NX45 425 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 PDP2Q9P2J9 529 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 CSNK1G3Q9Y6M4 447 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 RNF215Q9Y6U7 377 aa13.47□□□□□ -0.25
CALD1-207ENST00000430085 TP53BP1Q12888 1972 aaPredicted RBP13.46□□□□□ -0.25
CALD1-207ENST00000430085 THADAQ6YHU6 1953 aa13.46□□□□□ -0.25
CALD1-207ENST00000430085 VPS13AQ96RL7 3174 aa13.46□□□□□ -0.25
CALD1-207ENST00000430085 TLCD2A6NGC4 264 aa13.46□□□□□ -0.25
CALD1-207ENST00000430085 KIF1CO43896 1103 aaKnown RBP13.46□□□□□ -0.25
CALD1-207ENST00000430085 DNAJB6O75190 326 aa13.46□□□□□ -0.25
CALD1-207ENST00000430085 THRBP10828 461 aa13.46□□□□□ -0.25
CALD1-207ENST00000430085 DNAJA1P31689 397 aaKnown RBP13.46□□□□□ -0.25
CALD1-207ENST00000430085 CTSKP43235 329 aa13.46□□□□□ -0.25
CALD1-207ENST00000430085 SKP1P63208 163 aa13.46□□□□□ -0.25
CALD1-207ENST00000430085 BNIP3Q12983 259 aa13.46□□□□□ -0.25
CALD1-207ENST00000430085 COL9A2Q14055 689 aaPredicted RBP13.46□□□□□ -0.25
CALD1-207ENST00000430085 LASP1Q14847 261 aaKnown RBP13.46□□□□□ -0.25
CALD1-207ENST00000430085 RPS26P11Q5JNZ5 115 aaPredicted RBP13.46□□□□□ -0.25
CALD1-207ENST00000430085 TMEM179BQ7Z7N9 219 aa13.46□□□□□ -0.25
CALD1-207ENST00000430085 ARMC8Q8IUR7 673 aa13.46□□□□□ -0.25
CALD1-207ENST00000430085 SMYD1Q8NB12 490 aa13.46□□□□□ -0.25
CALD1-207ENST00000430085 GEMIN6Q8WXD5 167 aaKnown RBP13.46□□□□□ -0.25
CALD1-207ENST00000430085 C7orf34Q96L11 122 aa13.46□□□□□ -0.25
CALD1-207ENST00000430085 RDH12Q96NR8 316 aa13.46□□□□□ -0.25
CALD1-207ENST00000430085 ZNF607Q96SK3 696 aa13.46□□□□□ -0.25
CALD1-207ENST00000430085 NPLQ9BXD5 320 aaPredicted RBP13.46□□□□□ -0.25
CALD1-207ENST00000430085 SMURF2Q9HAU4 748 aa13.46□□□□□ -0.25
CALD1-207ENST00000430085 IRAK4Q9NWZ3 460 aa13.46□□□□□ -0.25
CALD1-207ENST00000430085 USE1Q9NZ43 259 aa13.46□□□□□ -0.25
CALD1-207ENST00000430085 FBXO4Q9UKT5 387 aa13.46□□□□□ -0.25
CALD1-207ENST00000430085 SAMHD1Q9Y3Z3 626 aaKnown RBP13.46□□□□□ -0.25
CALD1-207ENST00000430085 ZNF451Q9Y4E5 1061 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms