RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 PKLRP30613 574 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 SH3BP2P78314 561 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 ZXDBP98169 803 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 ACVR1Q04771 509 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 SGCBQ16585 318 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.29□□□□□ -0.44
PTCH1-207ENST00000429896 B3GNT6Q6ZMB0 384 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 VRK3Q8IV63 474 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 OR2L3Q8NG85 312 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 OR7G3Q8NG95 312 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 MOCOSQ96EN8 888 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 CRNNQ9UBG3 495 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-207ENST00000429896 MED31Q9Y3C7 131 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-207ENST00000429896 HAT1O14929 419 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 ZNF208O43345 1280 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 BCHEP06276 602 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 GGT5P36269 586 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 LAIR1Q6GTX8 287 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 CGREF1Q99674 301 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 PLEKHA1Q9HB21 404 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 S100A14Q9HCY8 104 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 EMC8O43402 210 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 IL12AP29459 219 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 KIR2DL1P43626 348 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-207ENST00000429896 BCAP31P51572 246 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 PLCXD2Q0VAA5 305 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 GALNT1Q10472 559 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-207ENST00000429896 IFI44LQ53G44 452 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 PDSS1Q5T2R2 415 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 C16orf78Q8WTQ4 265 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 SLC25A36Q96CQ1 311 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 G6PC3Q9BUM1 346 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 OR51V1Q9H2C8 321 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 LOC110117498-PIK3R3F6TDL0 507 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 PGRMC2O15173 223 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 CBX5P45973 191 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 ABHD18Q0P651 414 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 SERTAD2Q14140 314 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 COMMD6Q7Z4G1 85 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 OR4N5Q8IXE1 308 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 FRMD1Q8N878 549 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 THAP3Q8WTV1 239 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-207ENST00000429896 SLC38A4Q969I6 547 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 PTGES2Q9H7Z7 377 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 FBXO4Q9UKT5 387 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 ZFR2Q9UPR6 939 aaKnown RBP12.29□□□□□ -0.44
PTCH1-207ENST00000429896 PMF1-BGLAPU3KQ54 211 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 SHISA7A6NL88 538 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 OR7A10O76100 309 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 IFNGP01579 166 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 GSTT1P30711 240 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 MNDAP41218 407 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 MYBPC3Q14896 1274 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 TLR1Q15399 786 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 ZNF311Q5JNZ3 666 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 GRHL3Q8TE85 626 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 HPS1Q92902 700 aa12.29□□□□□ -0.44
PTCH1-207ENST00000429896 SOX1O00570 391 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-207ENST00000429896 SDHBP21912 280 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 GABRB3P28472 473 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 AHRP35869 848 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 MAN2A2P49641 1150 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 VASPP50552 380 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-207ENST00000429896 LASP1Q14847 261 aaKnown RBP12.28□□□□□ -0.44
PTCH1-207ENST00000429896 PPP1R3AQ16821 1122 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 IER5LQ5T953 404 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 GPR153Q6NV75 609 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 ZSWIM9Q86XI8 627 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 TP53I13Q8NBR0 393 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-207ENST00000429896 PTGDR2Q9Y5Y4 395 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 BLACEA4D250 179 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 CEACAM5P06731 702 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 RORAP35398 523 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 GDI2P50395 445 aaKnown RBP12.28□□□□□ -0.44
PTCH1-207ENST00000429896 RPS6KA3P51812 740 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 ZNF41P51814 821 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-207ENST00000429896 ARF3P61204 181 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-207ENST00000429896 ARF1P84077 181 aaKnown RBP12.28□□□□□ -0.44
PTCH1-207ENST00000429896 LILRA3Q8N6C8 439 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-207ENST00000429896 CHIAQ9BZP6 476 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 OR5K3A6NET4 321 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 PCDHGA12O60330 932 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 TXNL4AP83876 142 aaKnown RBP12.28□□□□□ -0.44
PTCH1-207ENST00000429896 MANEAQ5SRI9 462 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 P4HA3Q7Z4N8 544 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 KRTCAP2Q8N6L1 136 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 NUP43Q8NFH3 380 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 SNX33Q8WV41 574 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 LRRC58Q96CX6 371 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 C19orf43Q9BQ61 176 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 NTMT1Q9BV86 223 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 TPT1P8Q9HAU6 139 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 TESMINQ9Y4I5 508 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 OTOL1A6NHN0 477 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-207ENST00000429896 ELOA3DA6NLF2 546 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-207ENST00000429896 H0YGG7 62 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 SCAMP2O15127 329 aaKnown RBP12.28□□□□□ -0.44
PTCH1-207ENST00000429896 SERPINA3P01011 423 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 CXCR1P25024 350 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms