RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 EFCAB10A6NFE3 127 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 ZAR1LA6NP61 321 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 TBC1D3LB9A6J9 549 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 PRICKLE3O43900 615 aaPredicted RBP12.95□□□□□ -0.34
THBS3-202ENST00000428962 B4GALT2O60909 372 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 LCKP06239 509 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 HOXC4P09017 264 aaPredicted RBP12.95□□□□□ -0.34
THBS3-202ENST00000428962 TBC1D3HP0C7X1 549 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 CRISP1P54107 249 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 CRISP3P54108 245 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 UGT2B15P54855 530 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 LIM2P55344 173 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 STXBP1P61764 594 aaKnown RBP12.95□□□□□ -0.34
THBS3-202ENST00000428962 SLAMF1Q13291 335 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 LRRC32Q14392 662 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 NR1D2Q14995 579 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 PTGES3Q15185 160 aaKnown RBP12.95□□□□□ -0.34
THBS3-202ENST00000428962 DCST1Q5T197 706 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 TBC1D3GQ6DHY5 549 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 TBC1D3CQ6IPX1 549 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 ZNF770Q6IQ21 691 aaPredicted RBP12.95□□□□□ -0.34
THBS3-202ENST00000428962 ABHD17CQ6PCB6 329 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 KLHL17Q6TDP4 642 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 Q6ZNX1 250 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 MTSS1LQ765P7 747 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 CCDC103Q8IW40 242 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 TBC1D3Q8IZP1 549 aaPredicted RBP12.95□□□□□ -0.34
THBS3-202ENST00000428962 MFSD9Q8NBP5 474 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 OR56A1Q8NGH5 318 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 NDNFQ8TB73 568 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 GGHQ92820 318 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 MRPL38Q96DV4 380 aaKnown RBP12.95□□□□□ -0.34
THBS3-202ENST00000428962 TREX2Q9BQ50 279 aaPredicted RBP12.95□□□□□ -0.34
THBS3-202ENST00000428962 NKX2-4Q9H2Z4 354 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 ANKHQ9HCJ1 492 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 PRDM8Q9NQV8 689 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 GIMAP4Q9NUV9 329 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 CLN6Q9NWW5 311 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 CNOT2Q9NZN8 540 aaKnown RBP12.95□□□□□ -0.34
THBS3-202ENST00000428962 PLEKHM1Q9Y4G2 1056 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 GPC6Q9Y625 555 aaPredicted RBP12.95□□□□□ -0.34
THBS3-202ENST00000428962 PRSS38A1L453 326 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 FFAR1O14842 300 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 LINC01565O15544 149 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 UGT2B17O75795 530 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 GASTP01350 101 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 OR12D1P0DN82 309 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 HOXB2P14652 356 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 POU2F1P14859 743 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 CHMP24386 653 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 TGFBR2P37173 567 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 VBP1P61758 197 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 OLR1P78380 273 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 TMEM196Q5HYL7 178 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 MRM1Q6IN84 353 aaKnown RBP12.95□□□□□ -0.34
THBS3-202ENST00000428962 DEF8Q6ZN54 512 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 TMCO5AQ8N6Q1 288 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 AMER3Q8N944 861 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 ACOT4Q8N9L9 421 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 FAM46DQ8NEK8 389 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 CRELD1Q96HD1 420 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 UCK2Q9BZX2 261 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 SERHL2Q9H4I8 314 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 LYARQ9NX58 379 aaKnown RBP12.95□□□□□ -0.34
THBS3-202ENST00000428962 OR6C2Q9NZP2 312 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 RHCGQ9UBD6 479 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 NCKAP1Q9Y2A7 1128 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 SLC9A8Q9Y2E8 581 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 ASB4Q9Y574 426 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 SNX11Q9Y5W9 270 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 DSPPQ9NZW4 1301 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 LAMA2P24043 3122 aaKnown RBP12.94□□□□□ -0.34
THBS3-202ENST00000428962 TRBV4-1A0A0J9YWV2 114 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 EFCAB9A8MZ26 197 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 CBFA2T3O75081 653 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 NADKO95544 446 aaPredicted RBP12.94□□□□□ -0.34
THBS3-202ENST00000428962 FHP07954 510 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 OSMP13725 252 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 ATP5A1P25705 553 aaKnown RBP12.94□□□□□ -0.34
THBS3-202ENST00000428962 ELAVL4P26378 380 aaKnown RBP12.94□□□□□ -0.34
THBS3-202ENST00000428962 MAT2AP31153 395 aaKnown RBP12.94□□□□□ -0.34
THBS3-202ENST00000428962 OPRL1P41146 370 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 CLK1P49759 484 aaKnown RBP12.94□□□□□ -0.34
THBS3-202ENST00000428962 MLLT10P55197 1068 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 PRR5P85299 388 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 HYAL1Q12794 435 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 SFSWAPQ12872 951 aaKnown RBP12.94□□□□□ -0.34
THBS3-202ENST00000428962 HYAL2Q12891 473 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 MAPK11Q15759 364 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 TIGD6Q17RP2 521 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 ANKDD1AQ495B1 522 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 PRAMEF8Q5VWM4 474 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 PRAMEF7Q5VXH5 474 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 FRMPD2BQ6IN97 320 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 TCTN3Q6NUS6 607 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 ZBTB46Q86UZ6 589 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 LINC00471Q8N535 108 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 TMEM145Q8NBT3 493 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 OR8K5Q8NH50 307 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 SUN3Q8TAQ9 357 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms