RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 POU2F1P14859 743 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 CD1DP15813 335 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 RPA2P15927 270 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZNF8P17098 575 aaPredicted RBP5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 ENGP17813 658 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 PFKLP17858 780 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 PRKACGP22612 351 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 AHCYP23526 432 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 NMBRP28336 390 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 HOXA9P31269 272 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 HOXC13P31276 330 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 S100A3P33764 101 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 CTNNB1P35222 781 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 ATP5C1P36542 298 aaKnown RBP5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 TGFBR1P36897 503 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 CDKN2CP42773 168 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 CRYBB2P43320 205 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 BDKRB1P46663 353 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 MTNR1BP49286 362 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 RBP2P50120 134 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 ANXA11P50995 505 aaKnown RBP5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 SUOXP51687 545 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 RIDAP52758 137 aaKnown RBP5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 HCCSP53701 268 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 DIO3P55073 304 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 DLX5P56178 289 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 WNT4P56705 351 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 TPI1P60174 286 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 SEC61A1P61619 476 aaKnown RBP5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 SHC2P98077 582 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 HOXC5Q00444 222 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 BDH1Q02338 343 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 SCAPQ12770 1279 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 GPR176Q14439 515 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 MBTPS1Q14703 1052 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 GRM7Q14831 915 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 SMAD2Q15796 467 aaKnown RBP5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZNF239Q16600 458 aaKnown RBP5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 OCLNQ16625 522 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 SMN1Q16637 294 aaKnown RBP5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 VMACQ2NL98 169 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 SGO1Q5FBB7 561 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 PRSS36Q5K4E3 855 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 ELFN2Q5R3F8 820 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 OVOS1Q6IE37 1185 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 CDC73Q6P1J9 531 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 NCEH1Q6PIU2 408 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 PRSS55Q6UWB4 352 aaPredicted RBP5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 LYPD4Q6UWN0 246 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 CES3Q6UWW8 571 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 LRRN1Q6UXK5 716 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 QSOX2Q6ZRP7 698 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 USP30Q70CQ3 517 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 CBLL1Q75N03 491 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 TRMT11Q7Z4G4 463 aaKnown RBP5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 ISCA2Q86U28 154 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 UNC93AQ86WB7 457 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 SLC43A2Q8N370 569 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 SYNPOQ8N3V7 929 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 NANOGP1Q8N7R0 232 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 NAT16Q8N8M0 369 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 IPMKQ8NFU5 416 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 OR10G2Q8NGC3 310 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 OR11H7Q8NGC8 314 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 OR8J1Q8NGP2 316 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 OR5M3Q8NGP4 307 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 OR6K3Q8NGY3 331 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 COQ8AQ8NI60 647 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 SLC7A13Q8TCU3 470 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 RAET1EQ8TD07 263 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 NETO1Q8TDF5 533 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 OSTF1Q92882 214 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 ARL11Q969Q4 196 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 RAB24Q969Q5 203 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 EXOSC8Q96B26 276 aaKnown RBP5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 RNFT2Q96EX2 444 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 OR52E6Q96RD3 313 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 RTP3Q9BQQ7 232 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 CPPED1Q9BRF8 314 aaPredicted RBP5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 SYT17Q9BSW7 474 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 THAP7Q9BT49 309 aaPredicted RBP5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 CACNG6Q9BXT2 260 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 TEX101Q9BY14 249 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 BARHL1Q9BZE3 327 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 BCL2L14Q9BZR8 327 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 ADAM19Q9H013 955 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 METTL9Q9H1A3 318 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 PORCNQ9H237 461 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 LRRN3Q9H3W5 708 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 UNKLQ9H9P5 680 aaKnown RBP5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 SEBOXQ9HB31 216 aaPredicted RBP5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 GLOD4Q9HC38 313 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 HHATLQ9HCP6 504 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 DDX4Q9NQI0 724 aaKnown RBP5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 ENAMQ9NRM1 1142 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 NLE1Q9NVX2 485 aaPredicted RBP5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 ASB6Q9NWX5 421 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 SAGE1Q9NXZ1 904 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 TFCP2L1Q9NZI6 479 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 NUDT4Q9NZJ9 180 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms