RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 SDC2P34741 201 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 P2RX3P56373 397 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 RHAGQ02094 409 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 TEKQ02763 1124 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 LMAN2Q12907 356 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 CDKL4Q5MAI5 379 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 SLC35F1Q5T1Q4 408 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 PDZK1Q5T2W1 519 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 ANXA8L1Q5VT79 327 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 TANGO2Q6ICL3 276 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 CEACAM20Q6UY09 585 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 RTL10Q7L3V2 364 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 ARMCX6Q7L4S7 300 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 RDH10Q8IZV5 341 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 VWA5B2Q8N398 1253 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 DCAF4L2Q8NA75 395 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 OR52N2Q8NGI0 321 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 CHTF18Q8WVB6 975 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 SORCS1Q8WY21 1168 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 KLHL6Q8WZ60 621 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 SNAPC3Q92966 411 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 REPS1Q96D71 796 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 TMEM80Q96HE8 168 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 FRMD6Q96NE9 622 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 ASB16Q96NS5 453 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 MYADMQ96S97 322 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 CDCA3Q99618 268 aaPredicted RBP13.62□□□□□ -0.23
MSH5-206ENST00000423982 SORBS1Q9BX66 1292 aaKnown RBP13.62□□□□□ -0.23
MSH5-206ENST00000423982 TSSK6Q9BXA6 273 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 OR51B5Q9H339 312 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 SLA2Q9H6Q3 261 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 DZANK1Q9NVP4 752 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 NDRG2Q9UN36 371 aaKnown RBP13.62□□□□□ -0.23
MSH5-206ENST00000423982 CORO2BQ9UQ03 480 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 DNAH14Q0VDD8 3507 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 EIF3FO00303 357 aaPredicted RBP13.61□□□□□ -0.23
MSH5-206ENST00000423982 RNASET2O00584 256 aaKnown RBP13.61□□□□□ -0.23
MSH5-206ENST00000423982 ATP1B2P14415 290 aaPredicted RBP13.61□□□□□ -0.23
MSH5-206ENST00000423982 PPIBP23284 216 aaKnown RBP13.61□□□□□ -0.23
MSH5-206ENST00000423982 HLA-FP30511 346 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 MAN2A2P49641 1150 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 MESP2Q0VG99 397 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 ASAH1Q13510 395 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 ATAT1Q5SQI0 421 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 OR2G6Q5TZ20 316 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 ASTLQ6HA08 431 aaPredicted RBP13.61□□□□□ -0.23
MSH5-206ENST00000423982 HMGN2P46Q86SG4 172 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 TMPRSS11BQ86T26 416 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 SIX5Q8N196 739 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 CBARPQ8N350 705 aaPredicted RBP13.61□□□□□ -0.23
MSH5-206ENST00000423982 ZFP41Q8N8Y5 198 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 NEIL2Q969S2 332 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 SLC25A46Q96AG3 418 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 TM9SF2Q99805 663 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 RPP25Q9BUL9 199 aaKnown RBP13.61□□□□□ -0.23
MSH5-206ENST00000423982 NDUFB11Q9NX14 153 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 TOR4AQ9NXH8 423 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 SEC14L4Q9UDX3 406 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 SSR3Q9UNL2 185 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 TNNI3P19429 210 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 RPS5P46782 204 aaKnown RBP13.61□□□□□ -0.23
MSH5-206ENST00000423982 HMGA2P52926 109 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 ADAM15Q13444 863 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 C11orf74Q86VG3 221 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 NANOGP1Q8N7R0 232 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 SMARCD2Q92925 531 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 IRF7Q92985 503 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 WDFY2Q96P53 400 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 RETREG1Q9H6L5 497 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 ZDHHC4Q9NPG8 344 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 SPHK2Q9NRA0 654 aa13.61□□□□□ -0.23
MSH5-206ENST00000423982 STOX2Q9P2F5 926 aaPredicted RBP13.61□□□□□ -0.23
MSH5-206ENST00000423982 SERTM1A2A2V5 107 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 SGTAO43765 313 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 OR10H3O60404 316 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 ICMTO60725 284 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 IFNW1P05000 195 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 PSKH1P11801 424 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 SERPINA4P29622 427 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 LTBRP36941 435 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 ETV5P41161 510 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 ASMTP46597 345 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 ETV1P50549 477 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 RAB25P57735 213 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 C21orf58P58505 322 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 P2RY14Q15391 338 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 TATDN3Q17R31 274 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 RETSATQ6NUM9 610 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 TNFAIP8L2Q6P589 184 aaPredicted RBP13.6□□□□□ -0.23
MSH5-206ENST00000423982 TPRG1Q6ZUI0 275 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 USP30Q70CQ3 517 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 OLIG3Q7RTU3 272 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.6□□□□□ -0.23
MSH5-206ENST00000423982 OR4M1Q8NGD0 313 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 FZD3Q9NPG1 666 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 TVP23BQ9NYZ1 205 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 COMMD3Q9UBI1 195 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 DSPPQ9NZW4 1301 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 IGLV3-16A0A075B6K0 115 aa13.6□□□□□ -0.23
MSH5-206ENST00000423982 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms