RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 UEVLDQ8IX04 471 aa5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 ARFGAP2Q8N6H7 521 aa5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 BOLLQ8N9W6 283 aaKnown RBP5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 FAM98AQ8NCA5 519 aaKnown RBP5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 CFAP61Q8NHU2 1237 aa5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 CCL4L1Q8NHW4 92 aa5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 RHEBL1Q8TAI7 183 aa5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 FAM76AQ8TAV0 307 aa5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 STAG3L4Q8TBR4 150 aa5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 SKA2Q8WVK7 121 aaPredicted RBP5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 PTERQ96BW5 349 aa5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 FOPNLQ96NB1 174 aa5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 SELENOSQ9BQE4 189 aa5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 GATA5Q9BWX5 397 aaPredicted RBP5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 HDHD5Q9BXW7 423 aa5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 GSDMCQ9BYG8 508 aa5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 WWP1Q9H0M0 922 aa5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 OSGEPL1Q9H4B0 414 aa5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 ALG9Q9H6U8 611 aa5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 CNOT10Q9H9A5 744 aaKnown RBP5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 ERVMER34-1Q9H9K5 563 aa5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 SLC22A11Q9NSA0 550 aa5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 TMEM216Q9P0N5 145 aa5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 SLC17A7Q9P2U7 560 aa5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 SPASTQ9UBP0 616 aa5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 IKZF3Q9UKT9 509 aa5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 EMCNQ9ULC0 261 aa5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 R4GN57 208 aa5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 SPAG17Q6Q759 2223 aa5.62□□□□□ -1.51
NIFKP3-201ENST00000417799 LRRC3CA6NJW4 275 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 SYCE1LA8MT33 242 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 PDZK1P1A8MUH7 402 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 G3V2L1 256 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 RRHO14718 337 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 SLC16A5O15375 505 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 KERAO60938 352 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 PSIP1O75475 530 aaKnown RBP5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 CACNA1HO95180 2353 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 EPN2O95208 641 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 SLPIP03973 132 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 CATP04040 527 aaKnown RBP5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 SLC35G4P0C7Q5 338 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 CPA3P15088 417 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 TAC1P20366 129 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 AK4P27144 223 aaPredicted RBP5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 TACR3P29371 465 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 PGM1P36871 562 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 ACTR1BP42025 376 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 RXRGP48443 463 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 ARRB1P49407 418 aaPredicted RBP5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 ELLP55199 621 aaPredicted RBP5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 ACTR1AP61163 376 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 HNRNPKP61978 463 aaKnown RBP eCLIP5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 TUBA4AP68366 448 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 IRX4P78413 519 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 C1orf61Q13536 156 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 ELOCQ15369 112 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 RPE65Q16518 533 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 TECRLQ5HYJ1 363 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 ZNF318Q5VUA4 2279 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 LIPMQ5VYY2 423 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 MTFR2Q6P444 385 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 SLC30A9Q6PML9 568 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 SBSNQ6UWP8 590 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 UNC5DQ6UXZ4 953 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 MTERF4Q7Z6M4 381 aaKnown RBP5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 TAF8Q7Z7C8 310 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 TMEM200AQ86VY9 491 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 GPSM1Q86YR5 675 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 KMT2EQ8IZD2 1858 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 CCDC63Q8NA47 563 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 RDH11Q8TC12 318 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 MGARPQ8TDB4 240 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 MCOLN3Q8TDD5 553 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 CEP192Q8TEP8 1941 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 TFGQ92734 400 aaPredicted RBP5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 RMDN2Q96LZ7 410 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 ATOH8Q96SQ7 321 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 LRRC61Q9BV99 259 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 PRDM13Q9H4Q3 707 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 STN1Q9H668 368 aaKnown RBP5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 RDH14Q9HBH5 336 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 PARVBQ9HBI1 364 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 INTS9Q9NV88 658 aaKnown RBP5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 TAAR2Q9P1P5 351 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 CPSF2Q9P2I0 782 aaKnown RBP5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 TBC1D29Q9UFV1 150 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 APOBEC3BQ9UH17 382 aaKnown RBP5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 RAB23Q9ULC3 237 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 PSMD13Q9UNM6 376 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 PDE10AQ9Y233 779 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 WDR37Q9Y2I8 494 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 PCDHGA5Q9Y5G8 931 aa5.61□□□□□ -1.51
NIFKP3-201ENST00000417799 A6NCN8 305 aa5.6□□□□□ -1.51
NIFKP3-201ENST00000417799 PABPN1LA6NDY0 278 aaKnown RBP5.6□□□□□ -1.51
NIFKP3-201ENST00000417799 OR5K4A6NMS3 321 aa5.6□□□□□ -1.51
NIFKP3-201ENST00000417799 ARHGEF33A8MVX0 844 aa5.6□□□□□ -1.51
NIFKP3-201ENST00000417799 SUPT3HB4E1H0 165 aa5.6□□□□□ -1.51
NIFKP3-201ENST00000417799 LMO7DNF2Z398 122 aa5.6□□□□□ -1.51
NIFKP3-201ENST00000417799 UBXN8O00124 270 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms