RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 PLEKHA6Q9Y2H5 1048 aa11.94□□□□□ -0.5
LINC00339-202ENST00000416769 TNPO3Q9Y5L0 923 aaKnown RBP11.94□□□□□ -0.5
LINC00339-202ENST00000416769 ARHGAP21Q5T5U3 1957 aa11.94□□□□□ -0.5
LINC00339-202ENST00000416769 ATP6AP2A0A1C7CYW4 349 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 NCF1BA6NI72 391 aaPredicted RBP11.93□□□□□ -0.5
LINC00339-202ENST00000416769 NCF1CA8MVU1 366 aaPredicted RBP11.93□□□□□ -0.5
LINC00339-202ENST00000416769 ERI3O43414 337 aaKnown RBP11.93□□□□□ -0.5
LINC00339-202ENST00000416769 CTAG2O75638 210 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 ATP6AP2O75787 350 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 DHRS4L1P0CG22 281 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 GFAPP14136 432 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 NCF1P14598 390 aaPredicted RBP11.93□□□□□ -0.5
LINC00339-202ENST00000416769 KLK2P20151 261 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 HPDP32754 393 aaPredicted RBP11.93□□□□□ -0.5
LINC00339-202ENST00000416769 HK2P52789 917 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 DNAJB13P59910 316 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 FOXO1Q12778 655 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 SLC13A2Q13183 592 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 SETDB1Q15047 1291 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 PCBP2Q15366 365 aaKnown RBP eCLIP11.93□□□□□ -0.51e-7■■■□□ 14.9
LINC00339-202ENST00000416769 PFKFB4Q16877 469 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 SEM1Q6ZVN7 128 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 Q71RC1 249 aaPredicted RBP11.93□□□□□ -0.5
LINC00339-202ENST00000416769 TRILQ7L0X0 811 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 KLHDC8AQ8IYD2 350 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 ASB15Q8WXK1 588 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 CCT6BQ92526 530 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 EXT2Q93063 718 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 MS4A6EQ96DS6 147 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 QRFPRQ96P65 431 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 SMR3AQ99954 134 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 CD244Q9BZW8 370 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 CXXC4Q9H2H0 198 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 CNOT10Q9H9A5 744 aaKnown RBP11.93□□□□□ -0.5
LINC00339-202ENST00000416769 PELI2Q9HAT8 420 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 OXSMQ9NWU1 459 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 TUBA8Q9NY65 449 aaPredicted RBP11.93□□□□□ -0.5
LINC00339-202ENST00000416769 YARS2Q9Y2Z4 477 aaKnown RBP11.93□□□□□ -0.5
LINC00339-202ENST00000416769 DYRK1BQ9Y463 629 aa11.93□□□□□ -0.5
LINC00339-202ENST00000416769 A8MT66 165 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 CYR61O00622 381 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 BIRC5O15392 142 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 TRIM13O60858 407 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 STK16O75716 305 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 ZFAND5O76080 213 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 LRATO95237 230 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 BPGMP07738 259 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 SERPINA6P08185 405 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 IMPDH1P20839 514 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 PIGAP37287 484 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 SLC6A12P48065 614 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 PLA2G16P53816 162 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 PRKAA2P54646 552 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 RAB38P57729 211 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 NAA20P61599 178 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 ASPHQ12797 758 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 SLBPQ14493 270 aaKnown RBP eCLIP11.92□□□□□ -0.5
LINC00339-202ENST00000416769 HHATQ5VTY9 493 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 SLCO4C1Q6ZQN7 724 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 WDR53Q7Z5U6 358 aaPredicted RBP11.92□□□□□ -0.5
LINC00339-202ENST00000416769 ARFGAP2Q8N6H7 521 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 ANKRD42Q8N9B4 389 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 PTPMT1Q8WUK0 201 aaPredicted RBP11.92□□□□□ -0.5
LINC00339-202ENST00000416769 UBTD2Q8WUN7 234 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 PHF21BQ96EK2 531 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 AIF1LQ9BQI0 150 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 C1QTNF3Q9BXJ4 246 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 POLDIP3Q9BY77 421 aaKnown RBP11.92□□□□□ -0.5
LINC00339-202ENST00000416769 OR8D2Q9GZM6 311 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 DLL4Q9NR61 685 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 ALKBH4Q9NXW9 302 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 WWOXQ9NZC7 414 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 CRIM1Q9NZV1 1036 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 MYOTQ9UBF9 498 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 MMACHCQ9Y4U1 282 aa11.92□□□□□ -0.5
LINC00339-202ENST00000416769 FN1P02751 2386 aaKnown RBP11.92□□□□□ -0.5
LINC00339-202ENST00000416769 LRIT2A6NDA9 550 aa11.91□□□□□ -0.5
LINC00339-202ENST00000416769 H3BQF6 201 aa11.91□□□□□ -0.5
LINC00339-202ENST00000416769 HRKO00198 91 aa11.91□□□□□ -0.5
LINC00339-202ENST00000416769 PROM1O43490 865 aa11.91□□□□□ -0.5
LINC00339-202ENST00000416769 LDB3O75112 727 aa11.91□□□□□ -0.5
LINC00339-202ENST00000416769 SH3BGRLO75368 114 aa11.91□□□□□ -0.5
LINC00339-202ENST00000416769 IGHG3P01860 377 aa11.91□□□□□ -0.5
LINC00339-202ENST00000416769 RFPL3SP0C7P2 107 aa11.91□□□□□ -0.5
LINC00339-202ENST00000416769 ALDH3A1P30838 453 aa11.91□□□□□ -0.5
LINC00339-202ENST00000416769 SERPINB4P48594 390 aa11.91□□□□□ -0.5
LINC00339-202ENST00000416769 HSPA7P48741 367 aa11.91□□□□□ -0.5
LINC00339-202ENST00000416769 LIM2P55344 173 aa11.91□□□□□ -0.5
LINC00339-202ENST00000416769 WDR4P57081 412 aaKnown RBP11.91□□□□□ -0.5
LINC00339-202ENST00000416769 PCLAFQ15004 111 aa11.91□□□□□ -0.5
LINC00339-202ENST00000416769 ZNF678Q5SXM1 525 aa11.91□□□□□ -0.5
LINC00339-202ENST00000416769 LIPMQ5VYY2 423 aa11.91□□□□□ -0.5
LINC00339-202ENST00000416769 CES4AQ5XG92 561 aa11.91□□□□□ -0.5
LINC00339-202ENST00000416769 B3GNT6Q6ZMB0 384 aa11.91□□□□□ -0.5
LINC00339-202ENST00000416769 DGAT2L6Q6ZPD8 337 aa11.91□□□□□ -0.5
LINC00339-202ENST00000416769 ACAD11Q709F0 780 aa11.91□□□□□ -0.5
LINC00339-202ENST00000416769 NUDCD3Q8IVD9 361 aa11.91□□□□□ -0.5
LINC00339-202ENST00000416769 C10orf107Q8IVU9 208 aa11.91□□□□□ -0.5
LINC00339-202ENST00000416769 PTGR2Q8N8N7 351 aaPredicted RBP11.91□□□□□ -0.5
LINC00339-202ENST00000416769 RELL2Q8NC24 303 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms