RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 XKR7Q5GH72 579 aa13.71□□□□□ -0.21
SGCE-202ENST00000415788 LCN8Q6JVE9 175 aa13.71□□□□□ -0.21
SGCE-202ENST00000415788 PAGE2Q7Z2X7 111 aa13.71□□□□□ -0.21
SGCE-202ENST00000415788 ESX1Q8N693 406 aa13.71□□□□□ -0.21
SGCE-202ENST00000415788 SLC38A9Q8NBW4 561 aa13.71□□□□□ -0.21
SGCE-202ENST00000415788 QRFPRQ96P65 431 aa13.71□□□□□ -0.21
SGCE-202ENST00000415788 ABCD2Q9UBJ2 740 aa13.71□□□□□ -0.21
SGCE-202ENST00000415788 MRPS2Q9Y399 296 aaKnown RBP13.71□□□□□ -0.21
SGCE-202ENST00000415788 FOXS1O43638 330 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 VPS4BO75351 444 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 KLHL18O94889 574 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 MED26O95402 600 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 ONECUT2O95948 504 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 GPIP06744 558 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 CCNYL3P0C7X3 344 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 LINC00032P0C843 101 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 IL1RNP18510 177 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 SSR2P43308 183 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 SLC7A2P52569 658 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 TMBIM6P55061 237 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 BTN3A2P78410 334 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 DCDP81605 110 aaKnown RBP13.7□□□□□ -0.22
SGCE-202ENST00000415788 HMGCS1Q01581 520 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 KCNC4Q03721 635 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 ACSM2AQ08AH3 577 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 DSG2Q14126 1118 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 RAB39AQ14964 217 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 FAM219BQ5XKK7 198 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 ACSM2BQ68CK6 577 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 OR4C11Q6IEV9 310 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 C16orf87Q6PH81 154 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 SCIMPQ6UWF3 145 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 C6orf15Q6UXA7 325 aaPredicted RBP13.7□□□□□ -0.22
SGCE-202ENST00000415788 UBE3DQ7Z6J8 389 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 NUDT13Q86X67 352 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 METTL4Q8N3J2 472 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 SERINC2Q96SA4 455 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 GPATCH1Q9BRR8 931 aaKnown RBP13.7□□□□□ -0.22
SGCE-202ENST00000415788 C1orf50Q9BV19 199 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 ZNF304Q9HCX3 659 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 PRDM7Q9NQW5 492 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 NAALAD2Q9Y3Q0 740 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 CCL27Q9Y4X3 112 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 SPEGQ15772 3267 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 MDC1Q14676 2089 aaKnown RBP13.7□□□□□ -0.22
SGCE-202ENST00000415788 A0A0A6YYC8 382 aaPredicted RBP13.7□□□□□ -0.22
SGCE-202ENST00000415788 RNF103-CHMP3A0A140T963 221 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 SAC3D1A6NKF1 404 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 I3L1I5 382 aaPredicted RBP13.7□□□□□ -0.22
SGCE-202ENST00000415788 SAP18O00422 153 aaKnown RBP13.7□□□□□ -0.22
SGCE-202ENST00000415788 CLOCKO15516 846 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 B3GALT2O43825 422 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 SH3BGRLO75368 114 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 ATP6V1B2P21281 511 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 HIST1H1TP22492 207 aaPredicted RBP13.7□□□□□ -0.22
SGCE-202ENST00000415788 CAPGP40121 348 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 PMS2P3Q13401 168 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 TUBA3CQ13748 450 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 NR6A1Q15406 480 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 ANKDD1AQ495B1 522 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 ZNF385CQ66K41 422 aaPredicted RBP13.7□□□□□ -0.22
SGCE-202ENST00000415788 ZNF517Q6ZMY9 492 aaPredicted RBP13.7□□□□□ -0.22
SGCE-202ENST00000415788 Q6ZSR9 355 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 NLGN4XQ8N0W4 816 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 CENPSQ8N2Z9 138 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 ZCCHC7Q8N3Z6 543 aaKnown RBP13.7□□□□□ -0.22
SGCE-202ENST00000415788 DHRSXQ8N5I4 330 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 NLGN4YQ8NFZ3 816 aaPredicted RBP13.7□□□□□ -0.22
SGCE-202ENST00000415788 OR9A4Q8NGU2 314 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 CHTF18Q8WVB6 975 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 MMABQ96EY8 250 aaPredicted RBP13.7□□□□□ -0.22
SGCE-202ENST00000415788 PPP3R2Q96LZ3 170 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 FAM117AQ9C073 453 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 DDX31Q9H8H2 851 aaKnown RBP13.7□□□□□ -0.22
SGCE-202ENST00000415788 GID8Q9NWU2 228 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 C1orf109Q9NX04 203 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 SIRT5Q9NXA8 310 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 ACTR3BQ9P1U1 418 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 PADI1Q9ULC6 663 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 PTGDR2Q9Y5Y4 395 aa13.7□□□□□ -0.22
SGCE-202ENST00000415788 C4orf51C9J302 202 aa13.69□□□□□ -0.22
SGCE-202ENST00000415788 JUNBP17275 347 aaPredicted RBP13.69□□□□□ -0.22
SGCE-202ENST00000415788 ATP5A1P25705 553 aaKnown RBP13.69□□□□□ -0.22
SGCE-202ENST00000415788 HLCSP50747 726 aa13.69□□□□□ -0.22
SGCE-202ENST00000415788 KIF26BQ2KJY2 2108 aa13.69□□□□□ -0.22
SGCE-202ENST00000415788 NKAIN1Q4KMZ8 207 aa13.69□□□□□ -0.22
SGCE-202ENST00000415788 ATP6AP1LQ52LC2 224 aa13.69□□□□□ -0.22
SGCE-202ENST00000415788 C1orf189Q5VU69 101 aa13.69□□□□□ -0.22
SGCE-202ENST00000415788 GPR107Q5VW38 600 aa13.69□□□□□ -0.22
SGCE-202ENST00000415788 EPHX4Q8IUS5 362 aa13.69□□□□□ -0.22
SGCE-202ENST00000415788 ACOT4Q8N9L9 421 aa13.69□□□□□ -0.22
SGCE-202ENST00000415788 GALNT6Q8NCL4 622 aa13.69□□□□□ -0.22
SGCE-202ENST00000415788 ZNF717Q9BY31 904 aaPredicted RBP13.69□□□□□ -0.22
SGCE-202ENST00000415788 LRTM1Q9HBL6 345 aa13.69□□□□□ -0.22
SGCE-202ENST00000415788 LHX9Q9NQ69 397 aa13.69□□□□□ -0.22
SGCE-202ENST00000415788 TMED5Q9Y3A6 229 aa13.69□□□□□ -0.22
SGCE-202ENST00000415788 MAP4K5Q9Y4K4 846 aa13.69□□□□□ -0.22
SGCE-202ENST00000415788 SGK494L7N484 410 aa13.68□□□□□ -0.22
SGCE-202ENST00000415788 LSM1O15116 133 aaKnown RBP13.68□□□□□ -0.22
SGCE-202ENST00000415788 CD63P08962 238 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms