RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 OPTCQ9UBM4 332 aa11.47□□□□□ -0.57
NCKIPSD-203ENST00000415281 ERVK-11Q9UQG0 969 aa11.47□□□□□ -0.57
NCKIPSD-203ENST00000415281 MRPS33Q9Y291 106 aaKnown RBP11.47□□□□□ -0.57
NCKIPSD-203ENST00000415281 TSC22D4Q9Y3Q8 395 aa11.47□□□□□ -0.57
NCKIPSD-203ENST00000415281 A0A1W2PR48 441 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 KDM4EB2RXH2 506 aaPredicted RBP11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 PROM1O43490 865 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 TMPRSS11DO60235 418 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 SMIM24O75264 130 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 EEDO75530 441 aaKnown RBP11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 SIX3O95343 332 aaPredicted RBP11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 GLI4P10075 376 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 MSX1P28360 303 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 ALDH18A1P54886 795 aaKnown RBP11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 FOLH1Q04609 750 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 ASPHQ12797 758 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 SERTAD2Q14140 314 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 GRHL2Q6ISB3 625 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 MED27Q6P2C8 311 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 RTL4Q6ZR62 310 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 SEM1Q6ZVN7 128 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 TDRPQ86YL5 185 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 DMRTC2Q8IXT2 367 aaPredicted RBP11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 TEX9Q8N6V9 391 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 PTGR2Q8N8N7 351 aaPredicted RBP11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 GOLM1Q8NBJ4 401 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 WDR20Q8TBZ3 569 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 CMTM7Q96FZ5 175 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 MRPL57Q9BQC6 102 aaKnown RBP11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 FAM173AQ9BQD7 235 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 TTYH2Q9BSA4 534 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 PPCSQ9HAB8 311 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 IL1RL2Q9HB29 575 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 DMRT3Q9NQL9 472 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 ITGB1BP2Q9UKP3 347 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 ANGPTL3Q9Y5C1 460 aa11.46□□□□□ -0.57
NCKIPSD-203ENST00000415281 SPG11Q96JI7 2443 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 A0A088AWK7 358 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 A0A0A6YYD5 115 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 A0A0G2JNJ9 132 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 CCDC189A1A4V9 331 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 LRRC3CA6NJW4 275 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 CDH16O75309 829 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 TUBBP07437 444 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 HOXD4P09016 255 aaPredicted RBP11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 NUDT17P0C025 328 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 PCNAP12004 261 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 EPB42P16452 691 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 TNNI3P19429 210 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 ZNF10P21506 573 aaPredicted RBP11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 CPN2P22792 545 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 CHRNB4P30926 498 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 SLC37A1P57057 533 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 RPS13P62277 151 aaKnown RBP11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 SETDB1Q15047 1291 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 HIST2H2ACQ16777 129 aaPredicted RBP11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 AP5B1Q2VPB7 878 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 PAGE2BQ5JRK9 111 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 HIST2H2AA3Q6FI13 130 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 TMEM211Q6ICI0 200 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 POMZP3Q6PJE2 187 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 ZCCHC7Q8N3Z6 543 aaKnown RBP11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 ZNF441Q8N8Z8 693 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 NUBPLQ8TB37 319 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 ACMSDQ8TDX5 336 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 PAQR8Q8TEZ7 354 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 MTERF1Q99551 399 aaKnown RBP11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 MRPL46Q9H2W6 279 aaKnown RBP11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 RPF2Q9H7B2 306 aaKnown RBP11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 COPS7BQ9H9Q2 264 aaPredicted RBP11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 PRM3Q9NNZ6 103 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 RRAGDQ9NQL2 400 aaPredicted RBP11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 COQ3Q9NZJ6 369 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 Q9UFV3 132 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 DCDC2Q9UHG0 476 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 CNOT11Q9UKZ1 510 aaKnown RBP11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 RNF11Q9Y3C5 154 aa11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 CHCHD2Q9Y6H1 151 aaPredicted RBP11.45□□□□□ -0.58
NCKIPSD-203ENST00000415281 A0A1B0GTL3 188 aa11.44□□□□□ -0.58
NCKIPSD-203ENST00000415281 FAM90A27PA6NNH2 459 aa11.44□□□□□ -0.58
NCKIPSD-203ENST00000415281 H0YIV9 168 aa11.44□□□□□ -0.58
NCKIPSD-203ENST00000415281 AQP7O14520 342 aa11.44□□□□□ -0.58
NCKIPSD-203ENST00000415281 OR7A17O14581 309 aa11.44□□□□□ -0.58
NCKIPSD-203ENST00000415281 PGRMC2O15173 223 aa11.44□□□□□ -0.58
NCKIPSD-203ENST00000415281 SBK3P0C264 359 aa11.44□□□□□ -0.58
NCKIPSD-203ENST00000415281 CT62P0C5K7 136 aa11.44□□□□□ -0.58
NCKIPSD-203ENST00000415281 KRT4P19013 534 aa11.44□□□□□ -0.58
NCKIPSD-203ENST00000415281 CAPN3P20807 821 aa11.44□□□□□ -0.58
NCKIPSD-203ENST00000415281 ACVR2AP27037 513 aa11.44□□□□□ -0.58
NCKIPSD-203ENST00000415281 PIK3CBP42338 1070 aa11.44□□□□□ -0.58
NCKIPSD-203ENST00000415281 NEK2P51955 445 aa11.44□□□□□ -0.58
NCKIPSD-203ENST00000415281 TNFRSF17Q02223 184 aa11.44□□□□□ -0.58
NCKIPSD-203ENST00000415281 PLGLB1Q02325 96 aa11.44□□□□□ -0.58
NCKIPSD-203ENST00000415281 GTF2H2Q13888 395 aa11.44□□□□□ -0.58
NCKIPSD-203ENST00000415281 RASA2Q15283 850 aa11.44□□□□□ -0.58
NCKIPSD-203ENST00000415281 PCBP2Q15366 365 aaKnown RBP eCLIP11.44□□□□□ -0.58
NCKIPSD-203ENST00000415281 NDUFAF5Q5TEU4 345 aa11.44□□□□□ -0.58
NCKIPSD-203ENST00000415281 FNDC7Q5VTL7 733 aa11.44□□□□□ -0.58
NCKIPSD-203ENST00000415281 GTF2H2CQ6P1K8 395 aa11.44□□□□□ -0.58
NCKIPSD-203ENST00000415281 OPN5Q6U736 354 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms