RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 ZNF888P0CJ79 500 aaPredicted RBP23.18■■□□□ 1.3
VRK2-202ENST00000412104 C8orf89P0DMQ9 161 aa23.18■■□□□ 1.3
VRK2-202ENST00000412104 PCMT1P22061 227 aa23.18■■□□□ 1.3
VRK2-202ENST00000412104 KHKP50053 298 aa23.18■■□□□ 1.3
VRK2-202ENST00000412104 LIM2P55344 173 aa23.18■■□□□ 1.3
VRK2-202ENST00000412104 FBXO42Q6P3S6 717 aa23.18■■□□□ 1.3
VRK2-202ENST00000412104 Q6ZPB1 254 aaPredicted RBP23.18■■□□□ 1.3
VRK2-202ENST00000412104 OR10G6Q8NH81 332 aa23.18■■□□□ 1.3
VRK2-202ENST00000412104 XAGE5Q8WWM1 108 aa23.18■■□□□ 1.3
VRK2-202ENST00000412104 PROX1Q92786 737 aa23.18■■□□□ 1.3
VRK2-202ENST00000412104 MUL1Q969V5 352 aa23.18■■□□□ 1.3
VRK2-202ENST00000412104 ZNF607Q96SK3 696 aa23.18■■□□□ 1.3
VRK2-202ENST00000412104 PSD2Q9BQI7 771 aa23.18■■□□□ 1.3
VRK2-202ENST00000412104 CCDC90BQ9GZT6 254 aa23.18■■□□□ 1.3
VRK2-202ENST00000412104 RASSF1Q9NS23 344 aa23.18■■□□□ 1.3
VRK2-202ENST00000412104 TMEM9Q9P0T7 183 aa23.18■■□□□ 1.3
VRK2-202ENST00000412104 RHCGQ9UBD6 479 aa23.18■■□□□ 1.3
VRK2-202ENST00000412104 ARHGEF17Q96PE2 2063 aaPredicted RBP23.17■■□□□ 1.3
VRK2-202ENST00000412104 GSAPA4D1B5 854 aa23.17■■□□□ 1.3
VRK2-202ENST00000412104 PRAMEF26H0Y7S4 382 aa23.17■■□□□ 1.3
VRK2-202ENST00000412104 PCDHGA12O60330 932 aa23.17■■□□□ 1.3
VRK2-202ENST00000412104 POLR2CP19387 275 aaPredicted RBP23.17■■□□□ 1.3
VRK2-202ENST00000412104 FEN1P39748 380 aaKnown RBP23.17■■□□□ 1.3
VRK2-202ENST00000412104 PXNP49023 591 aaPredicted RBP23.17■■□□□ 1.3
VRK2-202ENST00000412104 SLC35A2P78381 396 aa23.17■■□□□ 1.3
VRK2-202ENST00000412104 SMN1Q16637 294 aaKnown RBP23.17■■□□□ 1.3
VRK2-202ENST00000412104 PROX2Q3B8N5 592 aa23.17■■□□□ 1.3
VRK2-202ENST00000412104 ENTHD1Q8IYW4 607 aa23.17■■□□□ 1.3
VRK2-202ENST00000412104 PHF10Q8WUB8 498 aaKnown RBP23.17■■□□□ 1.3
VRK2-202ENST00000412104 UBE2FQ969M7 185 aa23.17■■□□□ 1.3
VRK2-202ENST00000412104 COL21A1Q96P44 957 aa23.17■■□□□ 1.3
VRK2-202ENST00000412104 DUSP21Q9H596 190 aa23.17■■□□□ 1.3
VRK2-202ENST00000412104 SCN3BQ9NY72 215 aa23.17■■□□□ 1.3
VRK2-202ENST00000412104 ACTR10Q9NZ32 417 aa23.17■■□□□ 1.3
VRK2-202ENST00000412104 CYP8B1Q9UNU6 501 aa23.17■■□□□ 1.3
VRK2-202ENST00000412104 OR6C74A6NCV1 312 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 TOR1BO14657 336 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 TNFSF14O43557 240 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 CCNB2O95067 398 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 TNFP01375 233 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 SLC35G6P0C7Q6 338 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 CSNK2A2P19784 350 aaPredicted RBP23.16■■□□□ 1.3
VRK2-202ENST00000412104 ITIH1P19827 911 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 IGFBP4P22692 258 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 KRT20P35900 424 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 PRKAG1P54619 331 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 SNRPNP63162 240 aaKnown RBP23.16■■□□□ 1.3
VRK2-202ENST00000412104 TMEM107Q6UX40 140 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 UTP15Q8TED0 518 aaKnown RBP23.16■■□□□ 1.3
VRK2-202ENST00000412104 APH1BQ8WW43 257 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 PATE1Q8WXA2 126 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 OTUB1Q96FW1 271 aaPredicted RBP23.16■■□□□ 1.3
VRK2-202ENST00000412104 TCEAL2Q9H3H9 227 aaPredicted RBP23.16■■□□□ 1.3
VRK2-202ENST00000412104 ERVK-18Q9QC07 812 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 SEC14L3Q9UDX4 400 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 FFAR1O14842 300 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 CTSVO60911 334 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 NOL3O60936 208 aaKnown RBP23.16■■□□□ 1.3
VRK2-202ENST00000412104 WBP4O75554 376 aaKnown RBP23.16■■□□□ 1.3
VRK2-202ENST00000412104 IGLV3-19P01714 112 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 NR2F1P10589 423 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 PPP2R1BP30154 601 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 GGT2P36268 569 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 KCNJ5P48544 419 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 GSSP48637 474 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 KIAA0895LQ68EN5 471 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 FCRL6Q6DN72 434 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 BHLHB9Q6PI77 547 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 GPBAR1Q8TDU6 330 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 RASSF5Q8WWW0 418 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 ZNF354BQ96LW1 612 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 ALPK1Q96QP1 1244 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 OR2A5Q96R48 311 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 DCUN1D5Q9BTE7 237 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 DGCR6LQ9BY27 220 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 POLMQ9NP87 494 aaPredicted RBP23.16■■□□□ 1.3
VRK2-202ENST00000412104 TIMMDC1Q9NPL8 285 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 GIMAP4Q9NUV9 329 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 HCN4Q9Y3Q4 1203 aa23.16■■□□□ 1.3
VRK2-202ENST00000412104 HEMK1Q9Y5R4 338 aaPredicted RBP23.16■■□□□ 1.3
VRK2-202ENST00000412104 GPC6Q9Y625 555 aaPredicted RBP23.16■■□□□ 1.3
VRK2-202ENST00000412104 VIPP01282 170 aa23.15■■□□□ 1.3
VRK2-202ENST00000412104 HMGN2P05204 90 aaKnown RBP23.15■■□□□ 1.3
VRK2-202ENST00000412104 NR2F6P10588 404 aa23.15■■□□□ 1.3
VRK2-202ENST00000412104 MAGEA8P43361 318 aa23.15■■□□□ 1.3
VRK2-202ENST00000412104 CCR5P51681 352 aa23.15■■□□□ 1.3
VRK2-202ENST00000412104 TMBIM6P55061 237 aa23.15■■□□□ 1.3
VRK2-202ENST00000412104 LASP1Q14847 261 aaKnown RBP23.15■■□□□ 1.3
VRK2-202ENST00000412104 CEBPEQ15744 281 aa23.15■■□□□ 1.3
VRK2-202ENST00000412104 OR56A1Q8NGH5 318 aa23.15■■□□□ 1.3
VRK2-202ENST00000412104 TM4SF19Q96DZ7 209 aa23.15■■□□□ 1.3
VRK2-202ENST00000412104 TOE1Q96GM8 510 aaKnown RBP23.15■■□□□ 1.3
VRK2-202ENST00000412104 MSANTD3Q96H12 275 aa23.15■■□□□ 1.3
VRK2-202ENST00000412104 RHNO1Q9BSD3 238 aa23.15■■□□□ 1.3
VRK2-202ENST00000412104 YIPF4Q9BSR8 244 aa23.15■■□□□ 1.3
VRK2-202ENST00000412104 RNF6Q9Y252 685 aa23.15■■□□□ 1.3
VRK2-202ENST00000412104 PCDHGB1Q9Y5G3 927 aa23.15■■□□□ 1.3
VRK2-202ENST00000412104 A0A0J9YVX5 310 aa23.14■■□□□ 1.3
VRK2-202ENST00000412104 ARRDC5A6NEK1 342 aa23.14■■□□□ 1.3
VRK2-202ENST00000412104 TRIM64BA6NI03 449 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms