RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 GOLGA8NF8WBI6 632 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 OGTO15294 1046 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 CTAGE5O15320 804 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 GLRA3O75311 464 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 CLPTM1O96005 669 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 SERPINA3P01011 423 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 EDN1P05305 212 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 FGF4P08620 206 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 OR3A3P47888 321 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 ACADVLP49748 655 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 CLCN4P51793 760 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 GEMP55040 296 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 CBX1P83916 185 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 OPCMLQ14982 345 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 C1orf185Q5T7R7 199 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 SH2D5Q6ZV89 423 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 TRMT1LQ7Z2T5 733 aaKnown RBP4.53□□□□□ -1.68
LSM5-206ENST00000409987 EFL1Q7Z2Z2 1120 aaKnown RBP4.53□□□□□ -1.68
LSM5-206ENST00000409987 NANOGNBQ7Z5D8 188 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 PRUNE1Q86TP1 453 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 YRDCQ86U90 279 aaKnown RBP4.53□□□□□ -1.68
LSM5-206ENST00000409987 PRSS35Q8N3Z0 413 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 TMEM99Q8N816 258 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 TRPV3Q8NET8 790 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 ZNF397Q8NF99 534 aaPredicted RBP4.53□□□□□ -1.68
LSM5-206ENST00000409987 GPRC5AQ8NFJ5 357 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 OR2T11Q8NH01 316 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 PHYHIPQ92561 330 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 SEPT8Q92599 483 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 PINX1Q96BK5 328 aaKnown RBP4.53□□□□□ -1.68
LSM5-206ENST00000409987 EPYCQ99645 322 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 GON7Q9BXV9 100 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 PKIBQ9C010 78 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 C5orf66Q9H5L9 145 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 METTL7AQ9H8H3 244 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 SLC52A3Q9NQ40 469 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 DDX28Q9NUL7 540 aaKnown RBP4.53□□□□□ -1.68
LSM5-206ENST00000409987 BARHL2Q9NY43 387 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 GRID1Q9ULK0 1009 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 NSG2Q9Y328 171 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 SCN5AQ14524 2016 aa4.53□□□□□ -1.68
LSM5-206ENST00000409987 CEP170Q5SW79 1584 aa4.53□□□□□ -1.69
LSM5-206ENST00000409987 NPC1L1Q9UHC9 1359 aa4.53□□□□□ -1.69
LSM5-206ENST00000409987 IL16Q14005 1332 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 PMS2P5A8MQ11 134 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 CASC3O15234 703 aaKnown RBP4.52□□□□□ -1.69
LSM5-206ENST00000409987 SYT7O43581 403 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 KIF5CO60282 957 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 SDC3O75056 442 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 SNNO75324 88 aaPredicted RBP4.52□□□□□ -1.69
LSM5-206ENST00000409987 CDK2AP2O75956 126 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 CPNE6O95741 557 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 ATP1B1P05026 303 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 APRTP07741 180 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 UMODP07911 640 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 CD48P09326 243 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 UQCRFS1P1P0C7P4 283 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 FAM157CP0CG43 387 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 CT45A8P0DMV1 189 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 CT45A9P0DMV2 189 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 CCDC130P13994 396 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 ANPEPP15144 967 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 ITGB6P18564 788 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 CA8P35219 290 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 SFTPDP35247 375 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 DLSTP36957 453 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 PTGFRP43088 359 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 RGS4P49798 205 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 NLRP11P59045 1033 aaKnown RBP4.52□□□□□ -1.69
LSM5-206ENST00000409987 NME3Q13232 169 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 RBM39Q14498 530 aaKnown RBP4.52□□□□□ -1.69
LSM5-206ENST00000409987 EFTUD2Q15029 972 aaKnown RBP eCLIP4.52□□□□□ -1.692e-6■■■■■ 33.5
LSM5-206ENST00000409987 GPAT3Q53EU6 434 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 CT45A2Q5DJT8 189 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 RABGAP1LQ5R372 815 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 LCN1P1Q5VSP4 162 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 PRAMEF20Q5VT98 475 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 HIST2H2AA3Q6FI13 130 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 NIPAL3Q6P499 406 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 CBLN3Q6UW01 205 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 TMEM207Q6UWW9 146 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 G2E3Q7L622 706 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 CPEB2Q7Z5Q1 589 aaKnown RBP4.52□□□□□ -1.69
LSM5-206ENST00000409987 NR2C2APQ86WQ0 139 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 DCUN1D3Q8IWE4 304 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 RCOR2Q8IZ40 523 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 ARL14Q8N4G2 192 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 FAM184AQ8NB25 1140 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 COLGALT1Q8NBJ5 622 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 RNF149Q8NC42 400 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 BBOF1Q8ND07 529 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 OR7A2PQ8NGA2 310 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 OR52J3Q8NH60 311 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 MIPOL1Q8TD10 442 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 GIPC3Q8TF64 312 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 MCHR2Q969V1 340 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 RBM41Q96IZ5 413 aaKnown RBP4.52□□□□□ -1.69
LSM5-206ENST00000409987 VPS35Q96QK1 796 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 USP28Q96RU2 1077 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 RAB40CQ96S21 281 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms