RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 NT5EP21589 574 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 GPX3P22352 226 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 CERS1P27544 350 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 CYLC1P35663 651 aaPredicted RBP4.41□□□□□ -1.7
LSM5-205ENST00000409952 MATKP42679 507 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 BRWD1-AS2P59051 145 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 EIF3EP60228 445 aaKnown RBP4.41□□□□□ -1.7
LSM5-205ENST00000409952 HERVK_113P63132 956 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 ERVK-8P63133 956 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 NAAAQ02083 359 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 MAP2K1Q02750 393 aaPredicted RBP4.41□□□□□ -1.7
LSM5-205ENST00000409952 GPS2Q13227 327 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 HNRNPDQ14103 355 aaKnown RBP4.41□□□□□ -1.7
LSM5-205ENST00000409952 IL18Q14116 193 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 GRB14Q14449 540 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 HERC3Q15034 1050 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 DAZAP2Q15038 168 aaPredicted RBP4.41□□□□□ -1.7
LSM5-205ENST00000409952 WDR43Q15061 677 aaKnown RBP eCLIP4.41□□□□□ -1.7
LSM5-205ENST00000409952 MANEAQ5SRI9 462 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 TCEAL6Q6IPX3 200 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 TRMT11Q7Z4G4 463 aaKnown RBP4.41□□□□□ -1.7
LSM5-205ENST00000409952 PAQR7Q86WK9 346 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 C17orf64Q86WR6 236 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 TMEM219Q86XT9 240 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 CNGA4Q8IV77 575 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 ADHFE1Q8IWW8 467 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 PARP8Q8N3A8 854 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 TMEM199Q8N511 208 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 ARFGAP2Q8N6H7 521 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 RBMXL3Q8N7X1 1067 aaKnown RBP4.41□□□□□ -1.7
LSM5-205ENST00000409952 ADAD2Q8NCV1 583 aaKnown RBP4.41□□□□□ -1.7
LSM5-205ENST00000409952 ERVK-6Q9BXR3 956 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 NLNQ9BYT8 704 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 OR2B2Q9GZK3 357 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 XKR8Q9H6D3 395 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 KCNK13Q9HB14 408 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 LPAR2Q9HBW0 351 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 SDR39U1Q9NRG7 319 aaPredicted RBP4.41□□□□□ -1.7
LSM5-205ENST00000409952 ZNF346Q9UL40 294 aaKnown RBP4.41□□□□□ -1.7
LSM5-205ENST00000409952 CDH9Q9ULB4 789 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 PIGLQ9Y2B2 252 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 IFT52Q9Y366 437 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 MRPL11Q9Y3B7 192 aaKnown RBP4.41□□□□□ -1.7
LSM5-205ENST00000409952 ZNF175Q9Y473 711 aa4.41□□□□□ -1.7
LSM5-205ENST00000409952 PTPRUQ92729 1446 aa4.4□□□□□ -1.7
LSM5-205ENST00000409952 PPIAL4CA0A0B4J2A2 164 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 LOC101059948A0A1B0GTJ6 334 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 RPS10-NUDT3A0A1W2PQS6 291 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 LRRC30A6NM36 301 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 SRRM4A7MD48 611 aaKnown RBP4.4□□□□□ -1.71
LSM5-205ENST00000409952 A8MVM7 634 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 SPECC1L-ADORA2AF8WAN1 911 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 KIF2AO00139 706 aaPredicted RBP4.4□□□□□ -1.71
LSM5-205ENST00000409952 DNAJB6O75190 326 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 KRT14P02533 472 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 VTNP04004 478 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 ATP1B1P05026 303 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 PRKCGP05129 697 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 LINC00271P0C7V0 271 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 PPIAL4GP0DN37 164 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 DARSP14868 501 aaKnown RBP4.4□□□□□ -1.71
LSM5-205ENST00000409952 TSPAN8P19075 237 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 MSH3P20585 1137 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 PTBP1P26599 531 aaKnown RBP eCLIP4.4□□□□□ -1.713e-20■■■■■ 31.8
LSM5-205ENST00000409952 NF2P35240 595 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 MAGEA1P43355 309 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 CDH4P55283 916 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 CARD18P57730 90 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 SPAG1Q07617 926 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 SLC20A2Q08357 652 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 HNRNPA0Q13151 305 aaKnown RBP4.4□□□□□ -1.71
LSM5-205ENST00000409952 RBM39Q14498 530 aaKnown RBP4.4□□□□□ -1.71
LSM5-205ENST00000409952 ELAVL3Q14576 367 aaKnown RBP4.4□□□□□ -1.71
LSM5-205ENST00000409952 ZRSR1Q15695 479 aaKnown RBP4.4□□□□□ -1.71
LSM5-205ENST00000409952 PARP6Q2NL67 630 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 SPANXN2Q5MJ10 180 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 OR4C11Q6IEV9 310 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 FAM171BQ6P995 826 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 KDM7AQ6ZMT4 941 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 DPY19L2P2Q6ZN68 376 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 GPBP1Q86WP2 473 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 ELMOD1Q8N336 334 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 GPR137CQ8N3F9 429 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 PGBD5Q8N414 524 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 MAPKAPK5-AS1Q8N8E1 139 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 OLIG1Q8TAK6 271 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 PIGCQ92535 297 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 COQ8BQ96D53 544 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 AKR1E2Q96JD6 320 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 ACCSQ96QU6 501 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 CCNL2Q96S94 520 aaPredicted RBP4.4□□□□□ -1.71
LSM5-205ENST00000409952 C11orf70Q9BRQ4 267 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 ROPN1BQ9BZX4 212 aaPredicted RBP4.4□□□□□ -1.71
LSM5-205ENST00000409952 DHX33Q9H6R0 707 aaKnown RBP4.4□□□□□ -1.71
LSM5-205ENST00000409952 PELI2Q9HAT8 420 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 NEK6Q9HC98 313 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 ZFP14Q9HCL3 533 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 ZNHIT6Q9NWK9 470 aaKnown RBP4.4□□□□□ -1.71
LSM5-205ENST00000409952 TUBA8Q9NY65 449 aaPredicted RBP4.4□□□□□ -1.71
LSM5-205ENST00000409952 SMARCAL1Q9NZC9 954 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms