RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 ERAL1O75616 437 aaKnown RBP10.15□□□□□ -0.78
CHMP3-205ENST00000409810 DDAH2O95865 285 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 LINC00032P0C843 101 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 DDX5P17844 614 aaKnown RBP10.15□□□□□ -0.78
CHMP3-205ENST00000409810 CSNK2A2P19784 350 aaPredicted RBP10.15□□□□□ -0.78
CHMP3-205ENST00000409810 NT5EP21589 574 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 MAPK1P28482 360 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 TNFSF10P50591 281 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 GPR143P51810 404 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 MLF1P58340 268 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 RPL38P63173 70 aaKnown RBP10.15□□□□□ -0.78
CHMP3-205ENST00000409810 OC90Q02509 493 aaPredicted RBP10.15□□□□□ -0.78
CHMP3-205ENST00000409810 TLE1Q04724 770 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 MPP2Q14168 576 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 INAQ16352 499 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 ATP6AP1LQ52LC2 224 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 ATG16L1Q676U5 607 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 NOXRED1Q6NXP6 359 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 SLC29A4Q7RTT9 530 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 ARMC10Q8N2F6 343 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 LRRC25Q8N386 305 aaPredicted RBP10.15□□□□□ -0.78
CHMP3-205ENST00000409810 TMEM156Q8N614 296 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 NUBPLQ8TB37 319 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 CPT1CQ8TCG5 803 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 ZNF721Q8TF20 911 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 PPWD1Q96BP3 646 aaKnown RBP10.15□□□□□ -0.78
CHMP3-205ENST00000409810 SENP5Q96HI0 755 aaPredicted RBP10.15□□□□□ -0.78
CHMP3-205ENST00000409810 ATP6V1G3Q96LB4 118 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 C5orf34Q96MH7 638 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 TUBB1Q9H4B7 451 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 MYNNQ9NPC7 610 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 CES1P1Q9UKY3 287 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 YARS2Q9Y2Z4 477 aaKnown RBP10.15□□□□□ -0.78
CHMP3-205ENST00000409810 CCL27Q9Y4X3 112 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 PCDHGA10Q9Y5H3 936 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 CSAG2Q9Y5P2 127 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 PTGDR2Q9Y5Y4 395 aa10.15□□□□□ -0.78
CHMP3-205ENST00000409810 SHANK1Q9Y566 2161 aa10.15□□□□□ -0.79
CHMP3-205ENST00000409810 SPENQ96T58 3664 aaKnown RBP10.14□□□□□ -0.79
CHMP3-205ENST00000409810 J3QKU1 62 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 LSM1O15116 133 aaKnown RBP10.14□□□□□ -0.79
CHMP3-205ENST00000409810 ITGA10O75578 1167 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 LYPLA1O75608 230 aaPredicted RBP10.14□□□□□ -0.79
CHMP3-205ENST00000409810 F10P00742 488 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 ATP1B1P05026 303 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 PLA2G2AP14555 144 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 CD46P15529 392 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 DDCP20711 480 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 ASMTP46597 345 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 CYB561P49447 251 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 RPL14P50914 215 aaKnown RBP10.14□□□□□ -0.79
CHMP3-205ENST00000409810 SSR4P51571 173 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 WDR4P57081 412 aaKnown RBP10.14□□□□□ -0.79
CHMP3-205ENST00000409810 ERVK-8P63133 956 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 RNF4P78317 190 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 C2orf80Q0P641 193 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 MAD2L1Q13257 205 aaPredicted RBP10.14□□□□□ -0.79
CHMP3-205ENST00000409810 TUBA3CQ13748 450 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 ZNF267Q14586 743 aaPredicted RBP10.14□□□□□ -0.79
CHMP3-205ENST00000409810 KIAA0040Q15053 153 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 OR1C1Q15619 314 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 UGT3A2Q3SY77 523 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 PLEKHN1Q494U1 663 aaPredicted RBP10.14□□□□□ -0.79
CHMP3-205ENST00000409810 GALNTL6Q49A17 601 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 COLEC12Q5KU26 742 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 RPUSD3Q6P087 351 aaKnown RBP10.14□□□□□ -0.79
CHMP3-205ENST00000409810 TUBA3EQ6PEY2 450 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 RNF111Q6ZNA4 994 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 Q6ZSR9 355 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 GPALPP1Q8IXQ4 340 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 ZNF781Q8N8C0 355 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 Q8NA96 180 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 TMEM178AQ8NBL3 297 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 FAM98AQ8NCA5 519 aaKnown RBP10.14□□□□□ -0.79
CHMP3-205ENST00000409810 OR7G1Q8NGA0 311 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 OR2T11Q8NH01 316 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 THAP3Q8WTV1 239 aaPredicted RBP10.14□□□□□ -0.79
CHMP3-205ENST00000409810 ASB15Q8WXK1 588 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 UCN3Q969E3 161 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 TMEM125Q96AQ2 219 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 EXOSC8Q96B26 276 aaKnown RBP10.14□□□□□ -0.79
CHMP3-205ENST00000409810 ARL8AQ96BM9 186 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 C19orf60Q96EN9 201 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 FCRL1Q96LA6 429 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 NPAS2Q99743 824 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 SH3GL2Q99962 352 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 BRINP2Q9C0B6 783 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 CXorf21Q9HAI6 301 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 AGPAT4Q9NRZ5 378 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 LUZP4Q9P127 313 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 LRFN1Q9P244 771 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 MAP10Q9P2G4 905 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 MYOTQ9UBF9 498 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 HEY2Q9UBP5 337 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 ZNF223Q9UK11 482 aaPredicted RBP10.14□□□□□ -0.79
CHMP3-205ENST00000409810 ERVK-19Q9WJR5 959 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 CFL2Q9Y281 166 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 PCDHGB6Q9Y5F9 930 aa10.14□□□□□ -0.79
CHMP3-205ENST00000409810 FASNP49327 2511 aaKnown RBP10.13□□□□□ -0.79
CHMP3-205ENST00000409810 ESPL1Q14674 2120 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms