RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 NDUFS2O75306 463 aa19■□□□□ 0.63
USP39-204ENST00000409766 IGHV4-34P06331 123 aa19■□□□□ 0.63
USP39-204ENST00000409766 MAGEA8P43361 318 aa19■□□□□ 0.63
USP39-204ENST00000409766 BTN3A2P78410 334 aa19■□□□□ 0.63
USP39-204ENST00000409766 TGM3Q08188 693 aa19■□□□□ 0.63
USP39-204ENST00000409766 Q6ZPB1 254 aaPredicted RBP19■□□□□ 0.63
USP39-204ENST00000409766 ABI3BPQ7Z7G0 1075 aa19■□□□□ 0.63
USP39-204ENST00000409766 ASPGQ86U10 573 aa19■□□□□ 0.63
USP39-204ENST00000409766 TRIM73Q86UV7 250 aa19■□□□□ 0.63
USP39-204ENST00000409766 CCDC116Q8IYX3 515 aa19■□□□□ 0.63
USP39-204ENST00000409766 OR13H1Q8NG92 308 aa19■□□□□ 0.63
USP39-204ENST00000409766 OR9Q2Q8NGE9 314 aa19■□□□□ 0.63
USP39-204ENST00000409766 NT5CQ8TCD5 201 aa19■□□□□ 0.63
USP39-204ENST00000409766 SFXN5Q8TD22 340 aa19■□□□□ 0.63
USP39-204ENST00000409766 XAGE5Q8WWM1 108 aa19■□□□□ 0.63
USP39-204ENST00000409766 PROX1Q92786 737 aa19■□□□□ 0.63
USP39-204ENST00000409766 ZNF607Q96SK3 696 aa19■□□□□ 0.63
USP39-204ENST00000409766 CCDC90BQ9GZT6 254 aa19■□□□□ 0.63
USP39-204ENST00000409766 C6orf106Q9H6K1 298 aaPredicted RBP19■□□□□ 0.63
USP39-204ENST00000409766 RASSF1Q9NS23 344 aa19■□□□□ 0.63
USP39-204ENST00000409766 SCN3BQ9NY72 215 aa19■□□□□ 0.63
USP39-204ENST00000409766 ERVK-18Q9QC07 812 aa19■□□□□ 0.63
USP39-204ENST00000409766 HCN4Q9Y3Q4 1203 aa19■□□□□ 0.63
USP39-204ENST00000409766 A0A1W2PS29 197 aa19■□□□□ 0.63
USP39-204ENST00000409766 TMEM247A6NEH6 219 aa19■□□□□ 0.63
USP39-204ENST00000409766 MAGP20916 626 aa19■□□□□ 0.63
USP39-204ENST00000409766 PTGER1P34995 402 aa19■□□□□ 0.63
USP39-204ENST00000409766 KCNJ5P48544 419 aa19■□□□□ 0.63
USP39-204ENST00000409766 EMX1Q04741 257 aaPredicted RBP19■□□□□ 0.63
USP39-204ENST00000409766 GPR18Q14330 331 aa19■□□□□ 0.63
USP39-204ENST00000409766 CEBPEQ15744 281 aa19■□□□□ 0.63
USP39-204ENST00000409766 SLC22A18ASQ8N1D0 253 aa19■□□□□ 0.63
USP39-204ENST00000409766 FLCNQ8NFG4 579 aa19■□□□□ 0.63
USP39-204ENST00000409766 PHF10Q8WUB8 498 aaKnown RBP19■□□□□ 0.63
USP39-204ENST00000409766 APH1BQ8WW43 257 aa19■□□□□ 0.63
USP39-204ENST00000409766 TM4SF19Q96DZ7 209 aa19■□□□□ 0.63
USP39-204ENST00000409766 MAPKAP1Q9BPZ7 522 aa19■□□□□ 0.63
USP39-204ENST00000409766 LYARQ9NX58 379 aaKnown RBP19■□□□□ 0.63
USP39-204ENST00000409766 ENTPD4Q9Y227 616 aa19■□□□□ 0.63
USP39-204ENST00000409766 SCN3AQ9NY46 2000 aa18.99■□□□□ 0.63
USP39-204ENST00000409766 TRIOO75962 3097 aa18.99■□□□□ 0.63
USP39-204ENST00000409766 ARRDC5A6NEK1 342 aa18.99■□□□□ 0.63
USP39-204ENST00000409766 TOR1BO14657 336 aa18.99■□□□□ 0.63
USP39-204ENST00000409766 SEMA7AO75326 666 aa18.99■□□□□ 0.63
USP39-204ENST00000409766 C8orf89P0DMQ9 161 aa18.99■□□□□ 0.63
USP39-204ENST00000409766 ALPPL2P10696 532 aa18.99■□□□□ 0.63
USP39-204ENST00000409766 UGT2B7P16662 529 aa18.99■□□□□ 0.63
USP39-204ENST00000409766 CD6P30203 668 aa18.99■□□□□ 0.63
USP39-204ENST00000409766 GGT2P36268 569 aa18.99■□□□□ 0.63
USP39-204ENST00000409766 RABIFP47224 123 aa18.99■□□□□ 0.63
USP39-204ENST00000409766 RGS1Q08116 209 aa18.99■□□□□ 0.63
USP39-204ENST00000409766 ILF3Q12906 894 aaKnown RBP eCLIP18.99■□□□□ 0.635e-9■■■■■ 33.1
USP39-204ENST00000409766 NPTX1Q15818 432 aa18.99■□□□□ 0.63
USP39-204ENST00000409766 BHLHB9Q6PI77 547 aa18.99■□□□□ 0.63
USP39-204ENST00000409766 CHRDL2Q6WN34 429 aa18.99■□□□□ 0.63
USP39-204ENST00000409766 RASSF5Q8WWW0 418 aa18.99■□□□□ 0.63
USP39-204ENST00000409766 ZNF354BQ96LW1 612 aa18.99■□□□□ 0.63
USP39-204ENST00000409766 COL21A1Q96P44 957 aa18.99■□□□□ 0.63
USP39-204ENST00000409766 OR2A5Q96R48 311 aa18.99■□□□□ 0.63
USP39-204ENST00000409766 DCUN1D5Q9BTE7 237 aa18.99■□□□□ 0.63
USP39-204ENST00000409766 TTYH1Q9H313 450 aaPredicted RBP18.99■□□□□ 0.63
USP39-204ENST00000409766 RHCGQ9UBD6 479 aa18.99■□□□□ 0.63
USP39-204ENST00000409766 TRPC4Q9UBN4 977 aa18.99■□□□□ 0.63
USP39-204ENST00000409766 GPC6Q9Y625 555 aaPredicted RBP18.99■□□□□ 0.63
USP39-204ENST00000409766 PRAMEF26H0Y7S4 382 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 TMX2-CTNND1H3BSU7 103 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 CTSVO60911 334 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 CCNB2O95067 398 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 IGLV3-19P01714 112 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 ZNF888P0CJ79 500 aaPredicted RBP18.98■□□□□ 0.63
USP39-204ENST00000409766 CSNK2A2P19784 350 aaPredicted RBP18.98■□□□□ 0.63
USP39-204ENST00000409766 CBLP22681 906 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 KRT20P35900 424 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 FEN1P39748 380 aaKnown RBP18.98■□□□□ 0.63
USP39-204ENST00000409766 KHKP50053 298 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 PRKAG1P54619 331 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 SNRPNP63162 240 aaKnown RBP18.98■□□□□ 0.63
USP39-204ENST00000409766 COLEC12Q5KU26 742 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 TCTN3Q6NUS6 607 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 DGLUCYQ7Z3D6 616 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 GPBAR1Q8TDU6 330 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 UTP15Q8TED0 518 aaKnown RBP18.98■□□□□ 0.63
USP39-204ENST00000409766 FAR1Q8WVX9 515 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 ZNF681Q96N22 645 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 ALPK1Q96QP1 1244 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 RHNO1Q9BSD3 238 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 DGCR6LQ9BY27 220 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 SEC14L3Q9UDX4 400 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 RNF6Q9Y252 685 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 PCDHGA10Q9Y5H3 936 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 SERPINB7O75635 380 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 INMTO95050 263 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 VIPP01282 170 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 HMGN2P05204 90 aaKnown RBP18.98■□□□□ 0.63
USP39-204ENST00000409766 NR2F1P10589 423 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 CDK4P11802 303 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 POLR2CP19387 275 aaPredicted RBP18.98■□□□□ 0.63
USP39-204ENST00000409766 MPIP34949 423 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 GP2P55259 537 aaKnown RBP18.98■□□□□ 0.63
USP39-204ENST00000409766 FGD3Q5JSP0 725 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms