RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 SELENOWP63302 87 aa9.4□□□□□ -0.91
CUL1-202ENST00000409469 EEF1A2Q05639 463 aaKnown RBP9.4□□□□□ -0.91
CUL1-202ENST00000409469 ILF3Q12906 894 aaKnown RBP eCLIP9.4□□□□□ -0.91
CUL1-202ENST00000409469 SYPL1Q16563 259 aa9.4□□□□□ -0.91
CUL1-202ENST00000409469 ZNF425Q6IV72 752 aa9.4□□□□□ -0.91
CUL1-202ENST00000409469 TRIM40Q6P9F5 258 aa9.4□□□□□ -0.91
CUL1-202ENST00000409469 TMEM107Q6UX40 140 aa9.4□□□□□ -0.91
CUL1-202ENST00000409469 TAF8Q7Z7C8 310 aa9.4□□□□□ -0.91
CUL1-202ENST00000409469 RBM45Q8IUH3 476 aaKnown RBP9.4□□□□□ -0.91
CUL1-202ENST00000409469 ATG16L2Q8NAA4 619 aa9.4□□□□□ -0.91
CUL1-202ENST00000409469 OR8H1Q8NGG4 311 aa9.4□□□□□ -0.91
CUL1-202ENST00000409469 SLC37A2Q8TED4 501 aa9.4□□□□□ -0.91
CUL1-202ENST00000409469 COL26A1Q96A83 441 aa9.4□□□□□ -0.91
CUL1-202ENST00000409469 RNF31Q96EP0 1072 aa9.4□□□□□ -0.91
CUL1-202ENST00000409469 TMEM19Q96HH6 336 aa9.4□□□□□ -0.91
CUL1-202ENST00000409469 OR2A14Q96R47 310 aa9.4□□□□□ -0.91
CUL1-202ENST00000409469 UQCC2Q9BRT2 126 aa9.4□□□□□ -0.91
CUL1-202ENST00000409469 DOHHQ9BU89 302 aa9.4□□□□□ -0.91
CUL1-202ENST00000409469 EPS8L2Q9H6S3 715 aa9.4□□□□□ -0.91
CUL1-202ENST00000409469 TRPC4Q9UBN4 977 aa9.4□□□□□ -0.91
CUL1-202ENST00000409469 LOC100130705A0A1B0GUX0 176 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 M0R129 80 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 IL9P15248 144 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 GALNSP34059 522 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 BMP8BP34820 402 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 CCT3P49368 545 aaKnown RBP9.39□□□□□ -0.91
CUL1-202ENST00000409469 CD47Q08722 323 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 SLC9A5Q14940 896 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 ZIC1Q15915 447 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 SMN1Q16637 294 aaKnown RBP9.39□□□□□ -0.91
CUL1-202ENST00000409469 LAIR1Q6GTX8 287 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 LAIR2Q6ISS4 152 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 FBXO42Q6P3S6 717 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 COMTD1Q86VU5 262 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 OR9Q2Q8NGE9 314 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 VANGL1Q8TAA9 524 aaPredicted RBP9.39□□□□□ -0.91
CUL1-202ENST00000409469 FLVCR1-AS1Q8TAF5 88 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 XAGE5Q8WWM1 108 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 KAT2AQ92830 837 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 DNASE1L2Q92874 299 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 AMDHD1Q96NU7 426 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 CSF3RQ99062 836 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 RAB11FIP5Q9BXF6 653 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 RBM38Q9H0Z9 239 aaKnown RBP9.39□□□□□ -0.91
CUL1-202ENST00000409469 REEP1Q9H902 201 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 CTPS2Q9NRF8 586 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 RASSF1Q9NS23 344 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 ZCCHC3Q9NUD5 404 aaKnown RBP9.39□□□□□ -0.91
CUL1-202ENST00000409469 USP36Q9P275 1121 aaKnown RBP9.39□□□□□ -0.91
CUL1-202ENST00000409469 KIF17Q9P2E2 1029 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 ASB4Q9Y574 426 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 PTGES3LE9PB15 166 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 HMGN4O00479 90 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 APBB3O95704 486 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 VIPP01282 170 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 UQCRC2P22695 453 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 PPIBP23284 216 aaKnown RBP9.39□□□□□ -0.91
CUL1-202ENST00000409469 RNF144AP50876 292 aaPredicted RBP9.39□□□□□ -0.91
CUL1-202ENST00000409469 SPIBQ01892 262 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 FZD2Q14332 565 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 LASP1Q14847 261 aaKnown RBP9.39□□□□□ -0.91
CUL1-202ENST00000409469 MAPK11Q15759 364 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 PAQR7Q86WK9 346 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 C8orf59Q8N0T1 100 aaPredicted RBP9.39□□□□□ -0.91
CUL1-202ENST00000409469 NLGN4XQ8N0W4 816 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 SVOPLQ8N434 492 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 OR2L5Q8NG80 312 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 OR9A2Q8NGT5 310 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 SUN3Q8TAQ9 357 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 RSC1A1Q92681 617 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 MTERF3Q96E29 417 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 C16orf58Q96GQ5 468 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 KCNC2Q96PR1 638 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 BBS4Q96RK4 519 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 PHF7Q9BWX1 381 aaPredicted RBP9.39□□□□□ -0.91
CUL1-202ENST00000409469 FAM192AQ9GZU8 254 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 TM9SF3Q9HD45 589 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 CD320Q9NPF0 282 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 SLC35C2Q9NQQ7 365 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 OR6C2Q9NZP2 312 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 CDC14AQ9UNH5 594 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 CORO2BQ9UQ03 480 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 KCNE3Q9Y6H6 103 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 AP1M2Q9Y6Q5 423 aa9.39□□□□□ -0.91
CUL1-202ENST00000409469 MAN2B1O00754 1011 aa9.38□□□□□ -0.91
CUL1-202ENST00000409469 CASC3O15234 703 aaKnown RBP9.38□□□□□ -0.91
CUL1-202ENST00000409469 TPST2O60704 377 aa9.38□□□□□ -0.91
CUL1-202ENST00000409469 FMO3P31513 532 aa9.38□□□□□ -0.91
CUL1-202ENST00000409469 RPL3P39023 403 aaKnown RBP9.38□□□□□ -0.91
CUL1-202ENST00000409469 HNRNPFP52597 415 aaKnown RBP9.38□□□□□ -0.91
CUL1-202ENST00000409469 NR1H2P55055 460 aa9.38□□□□□ -0.91
CUL1-202ENST00000409469 SIM1P81133 766 aaPredicted RBP9.38□□□□□ -0.91
CUL1-202ENST00000409469 IL5RAQ01344 420 aa9.38□□□□□ -0.91
CUL1-202ENST00000409469 PMS2P3Q13401 168 aa9.38□□□□□ -0.91
CUL1-202ENST00000409469 SAXO2Q658L1 398 aa9.38□□□□□ -0.91
CUL1-202ENST00000409469 FCRL6Q6DN72 434 aa9.38□□□□□ -0.91
CUL1-202ENST00000409469 GPR153Q6NV75 609 aa9.38□□□□□ -0.91
CUL1-202ENST00000409469 ZBTB46Q86UZ6 589 aa9.38□□□□□ -0.91
CUL1-202ENST00000409469 DENND6BQ8NEG7 585 aa9.38□□□□□ -0.91
CUL1-202ENST00000409469 FAM46DQ8NEK8 389 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms