RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 ACTR10Q9NZ32 417 aa23.92■■□□□ 1.42
SPIRE1-202ENST00000409402 LRRC42Q9Y546 428 aa23.92■■□□□ 1.42
SPIRE1-202ENST00000409402 GJE1A6NN92 205 aa23.92■■□□□ 1.42
SPIRE1-202ENST00000409402 DRGXA6NNA5 263 aa23.92■■□□□ 1.42
SPIRE1-202ENST00000409402 NUAK1O60285 661 aa23.92■■□□□ 1.42
SPIRE1-202ENST00000409402 FAM189A1O60320 539 aa23.92■■□□□ 1.42
SPIRE1-202ENST00000409402 SLC16A8O95907 504 aa23.92■■□□□ 1.42
SPIRE1-202ENST00000409402 KANK2Q63ZY3 851 aa23.92■■□□□ 1.42
SPIRE1-202ENST00000409402 GALNT10Q86SR1 603 aa23.92■■□□□ 1.42
SPIRE1-202ENST00000409402 S100A16Q96FQ6 103 aaKnown RBP23.92■■□□□ 1.42
SPIRE1-202ENST00000409402 ZNF778Q96MU6 729 aa23.92■■□□□ 1.42
SPIRE1-202ENST00000409402 PTTG2Q9NZH5 202 aa23.92■■□□□ 1.42
SPIRE1-202ENST00000409402 A0A0J9YY10 115 aa23.92■■□□□ 1.42
SPIRE1-202ENST00000409402 CDRT1O95170 752 aa23.92■■□□□ 1.42
SPIRE1-202ENST00000409402 HERV-K104P61576 105 aa23.92■■□□□ 1.42
SPIRE1-202ENST00000409402 CRYZQ08257 329 aaKnown RBP23.92■■□□□ 1.42
SPIRE1-202ENST00000409402 GLT8D1Q68CQ7 371 aa23.92■■□□□ 1.42
SPIRE1-202ENST00000409402 RANBP10Q6VN20 620 aa23.92■■□□□ 1.42
SPIRE1-202ENST00000409402 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.92■■□□□ 1.42
SPIRE1-202ENST00000409402 ENY2Q9NPA8 101 aa23.92■■□□□ 1.42
SPIRE1-202ENST00000409402 CCDC59Q9P031 241 aaKnown RBP23.92■■□□□ 1.42
SPIRE1-202ENST00000409402 SPO11Q9Y5K1 396 aa23.92■■□□□ 1.42
SPIRE1-202ENST00000409402 HCFC2Q9Y5Z7 792 aa23.92■■□□□ 1.42
SPIRE1-202ENST00000409402 CD6P30203 668 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 DDIT4LQ96D03 193 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 TCEAL4Q96EI5 215 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 PRR11Q96HE9 360 aaPredicted RBP23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 HHIPL1Q96JK4 782 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 TTTY10Q9BZA0 68 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 PREBQ9HCU5 417 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 IL26Q9NPH9 171 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 EIF3KQ9UBQ5 218 aaKnown RBP23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 NAV1Q8NEY1 1877 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 KIR2DS5A0A0G2JLQ3 304 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 A0A0G2JNG1 304 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 KIR2DS3K7RE56 304 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 BRINP1O60477 761 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 ADAM15Q13444 863 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 KIR2DS5Q14953 304 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 OR14L1PQ8NHC6 308 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 PVALBP20472 110 aaPredicted RBP23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 CARTPTQ16568 116 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 ZNF554Q86TJ5 538 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 ADAMTSL3P82987 1691 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 GPR89AB7ZAQ6 455 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 GPR89BP0CG08 455 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 HTR1EP28566 365 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 MALLQ13021 153 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 PDZD3Q86UT5 571 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 C3orf58Q8NDZ4 430 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 OR52B6Q8NGF0 335 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 MNTQ99583 582 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 VNN3Q9NY84 501 aa23.91■■□□□ 1.42
SPIRE1-202ENST00000409402 POLR1CO15160 346 aaPredicted RBP23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 ACTC1P68032 377 aa23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 ACTA1P68133 377 aa23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 MEP1AQ16819 746 aa23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 EXOC3L2Q2M3D2 409 aa23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 FUBP1Q96AE4 644 aaKnown RBP23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 DNAJA3Q96EY1 480 aa23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 TMPRSS11EQ9UL52 423 aa23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 TMEM14AQ9Y6G1 99 aa23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 PRKCAP17252 672 aa23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 RPS26P62854 115 aaKnown RBP23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 TUBA3CQ13748 450 aa23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 CRB3Q9BUF7 120 aa23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 TUBA8Q9NY65 449 aaPredicted RBP23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 KDM3BQ7LBC6 1761 aa23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 PRSS56P0CW18 603 aa23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 CLDN2P57739 230 aa23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 GAS6Q14393 721 aa23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 ALG10Q5BKT4 473 aa23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 SMAD6O43541 496 aaKnown RBP23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 HOXD8P13378 290 aaPredicted RBP23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 CD68P34810 354 aaPredicted RBP23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 GRIK2Q13002 908 aa23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 ZBED5Q49AG3 693 aa23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 CST9Q5W186 159 aa23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 PTGDR2Q9Y5Y4 395 aa23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 CTC1Q2NKJ3 1217 aa23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 NDUFAF5Q5TEU4 345 aa23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 MCOLN1Q9GZU1 580 aa23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 SEC14L4Q9UDX3 406 aa23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 CCDC88AQ3V6T2 1871 aa23.9■■□□□ 1.42
SPIRE1-202ENST00000409402 ARHGEF15O94989 841 aa23.89■■□□□ 1.42
SPIRE1-202ENST00000409402 KIR2DS3Q14952 304 aa23.89■■□□□ 1.42
SPIRE1-202ENST00000409402 HMGN2P46Q86SG4 172 aa23.89■■□□□ 1.42
SPIRE1-202ENST00000409402 OR5T2Q8NGG2 359 aa23.89■■□□□ 1.42
SPIRE1-202ENST00000409402 UBE2Q1Q7Z7E8 422 aa23.89■■□□□ 1.42
SPIRE1-202ENST00000409402 BARD1Q99728 777 aaKnown RBP23.89■■□□□ 1.42
SPIRE1-202ENST00000409402 IL17CQ9P0M4 197 aa23.89■■□□□ 1.42
SPIRE1-202ENST00000409402 PCTPQ9UKL6 214 aa23.89■■□□□ 1.42
SPIRE1-202ENST00000409402 WASH4PA8MWX3 477 aa23.89■■□□□ 1.41
SPIRE1-202ENST00000409402 KDELR2P33947 212 aa23.89■■□□□ 1.41
SPIRE1-202ENST00000409402 GALK2Q01415 458 aa23.89■■□□□ 1.41
SPIRE1-202ENST00000409402 ZNF252P-AS1Q0IIN9 211 aa23.89■■□□□ 1.41
SPIRE1-202ENST00000409402 ATP6AP1Q15904 470 aa23.89■■□□□ 1.41
SPIRE1-202ENST00000409402 SNX29P2Q8IUI4 249 aa23.89■■□□□ 1.41
SPIRE1-202ENST00000409402 TMEM151BQ8IW70 566 aa23.89■■□□□ 1.41
SPIRE1-202ENST00000409402 RTP4Q96DX8 246 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms