RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 CCDC106Q9BWC9 280 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 MYLK2Q9H1R3 596 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 GIMAP4Q9NUV9 329 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 EHD3Q9NZN3 535 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 PSME2Q9UL46 239 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 WBP11Q9Y2W2 641 aaKnown RBP13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 CAPN7Q9Y6W3 813 aa13.2□□□□□ -0.3
CHRNA1-204ENST00000409323 FAM234BA2RU67 622 aa13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 ASPDHA6ND91 283 aa13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 SOCS6O14544 535 aa13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 CFLARO15519 480 aa13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 EFSO43281 561 aa13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 PGRP06401 933 aa13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 CELA2AP08217 269 aa13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 CSNK2A2P19784 350 aaPredicted RBP13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 NTSP30990 170 aa13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 CDK9P50750 372 aaKnown RBP13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 KCNK10P57789 538 aa13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 ATP1A4Q13733 1029 aa13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 BLOC1S3Q6QNY0 202 aa13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 KIRREL2Q6UWL6 708 aa13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 ERMP1Q7Z2K6 904 aa13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 TRPM8Q7Z2W7 1104 aa13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 SNX32Q86XE0 403 aa13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 LRRC25Q8N386 305 aaPredicted RBP13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 SPDL1Q96EA4 605 aa13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 RBM18Q96H35 190 aaKnown RBP13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 AMDHD1Q96NU7 426 aa13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 LRRC37BQ96QE4 947 aa13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 CNPPD1Q9BV87 410 aa13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 SEMA3GQ9NS98 782 aa13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 ERVK-11Q9UQG0 969 aa13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 IGF2RP11717 2491 aa13.19□□□□□ -0.3
CHRNA1-204ENST00000409323 A0A1W2PRB8 838 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 CCDC154A6NI56 674 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 MYO1GB0I1T2 1018 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 C17orf105B2RV13 164 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 TAF4O00268 1085 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 C1QCP02747 245 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 CAPNS1P04632 268 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 GSNP06396 782 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 MMP11P24347 488 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 ITPKBP27987 946 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 CDKN2CP42773 168 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 MANFP55145 182 aaKnown RBP13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 C21orf58P58505 322 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 IGLV3-21P80748 117 aaPredicted RBP13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 ZNF267Q14586 743 aaPredicted RBP13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 SSPNQ14714 243 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 EXOSC7Q15024 291 aaKnown RBP13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 LACTB2Q53H82 288 aaPredicted RBP13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 PAPD4Q6PIY7 484 aaKnown RBP13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 TMEM205Q6UW68 189 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 TMEM107Q6UX40 140 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 SZRD1Q7Z422 152 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 CPEB2Q7Z5Q1 589 aaKnown RBP13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 SPACA3Q8IXA5 215 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 FAM9CQ8IZT9 166 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 FITM2Q8N6M3 262 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 OR5AK3PQ8NH89 298 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 MTERF3Q96E29 417 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 ATAD3AQ9NVI7 634 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 TAS2R7Q9NYW3 318 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 PCDHGA6Q9Y5G7 932 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 SNX8Q9Y5X2 465 aa13.18□□□□□ -0.3
CHRNA1-204ENST00000409323 BLACEA4D250 179 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 PRKNO60260 465 aaPredicted RBP13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 SCN2BO60939 215 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 DCTN3O75935 186 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 SLC35E2P0CK97 266 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 PCSK2P16519 638 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 SSTR4P31391 388 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 GPC1P35052 558 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 SOX18P35713 384 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 RPL3P39023 403 aaKnown RBP13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 MC3RP41968 323 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 STT3AP46977 705 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 CPA2P48052 419 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 MRPL19P49406 292 aaKnown RBP13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 CASP9P55211 416 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 HBA1P69905 142 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 SRSF11Q05519 484 aaKnown RBP13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 CHAF1BQ13112 559 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 SERTAD2Q14140 314 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 RCAN2Q14206 197 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 GTDC1Q4AE62 458 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 TRMT12Q53H54 448 aaKnown RBP13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 PAGE3Q5JUK9 113 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 MED25Q71SY5 747 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 CAMKMTQ7Z624 323 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 MRGPREQ86SM8 312 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 ST13P4Q8IZP2 240 aaPredicted RBP13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 OR11G2Q8NGC1 345 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 OR8J2Q8NGG1 315 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 OR4A15Q8NGL6 344 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 PTPMT1Q8WUK0 201 aaPredicted RBP13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 ZCCHC14Q8WYQ9 949 aaKnown RBP13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 RIT1Q92963 219 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 CCNL2Q96S94 520 aaPredicted RBP13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 WDR77Q9BQA1 342 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms