RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 TMIEQ8NEW7 156 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 OR5K2Q8NHB8 316 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 SUN3Q8TAQ9 357 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 ZNF764Q96H86 408 aaPredicted RBP9.32□□□□□ -0.92
MSH2-202ENST00000406134 ZFYVE19Q96K21 471 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 ZNF354BQ96LW1 612 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 NDUFB11Q9NX14 153 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 TAC3Q9UHF0 121 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 MKLN1Q9UL63 735 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 TRIOO75962 3097 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 HTR3EA5X5Y0 456 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 CCRL2O00421 344 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 AP3D1O14617 1153 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 SEMA3DO95025 777 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 ZIC2O95409 532 aaPredicted RBP9.32□□□□□ -0.92
MSH2-202ENST00000406134 HSMCR30P0CW71 290 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 VEGFBP49765 207 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 ZNF91Q05481 1191 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 FZD5Q13467 585 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 TSTA3Q13630 321 aaPredicted RBP9.32□□□□□ -0.92
MSH2-202ENST00000406134 NXNL2Q5VZ03 156 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 C6orf120Q7Z4R8 191 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 NANOGP1Q8N7R0 232 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 FAM181AQ8N9Y4 354 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 ZNF485Q8NCK3 441 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 ABHD8Q96I13 439 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 TREX2Q9BQ50 279 aaPredicted RBP9.32□□□□□ -0.92
MSH2-202ENST00000406134 PLA2G12AQ9BZM1 189 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 SIAEQ9HAT2 523 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 DYRK4Q9NR20 520 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 MUTYHQ9UIF7 546 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 TRAPPC4Q9Y296 219 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 SNX8Q9Y5X2 465 aa9.32□□□□□ -0.92
MSH2-202ENST00000406134 EFCAB10A6NFE3 127 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 M0R3H8 397 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 NDUFB5O43674 189 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 SNX4O95219 450 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 KRT75O95678 551 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 OR12D1P0DN82 309 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 RCVRNP35243 200 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 RPL3P39023 403 aaKnown RBP9.31□□□□□ -0.92
MSH2-202ENST00000406134 P2RY2P41231 377 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 TPTEP56180 551 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 MLC1Q15049 377 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 MED22Q15528 200 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 HNRNPA1L2Q32P51 320 aaKnown RBP9.31□□□□□ -0.92
MSH2-202ENST00000406134 C2orf27AQ580R0 203 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 PIP5KL1Q5T9C9 394 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 HMGN2P46Q86SG4 172 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 SP7Q8TDD2 431 aaPredicted RBP9.31□□□□□ -0.92
MSH2-202ENST00000406134 OR5P2Q8WZ92 322 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 OTUB2Q96DC9 234 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 ZNF649Q9BS31 505 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 GLIPR2Q9H4G4 154 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 SF3B6Q9Y3B4 125 aaKnown RBP9.31□□□□□ -0.92
MSH2-202ENST00000406134 A0A075B6Q4 140 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 TLR4O00206 839 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 CHRM4P08173 479 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 MMP11P24347 488 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 SSTR4P31391 388 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 DRD3P35462 400 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 CD79BP40259 229 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 VIPR2P41587 438 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 GPR1P46091 355 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 HSPB3Q12988 150 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 ZNF697Q5TEC3 545 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 PTCHD4Q6ZW05 846 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 ZER1Q7Z7L7 766 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 Q8N9G6 341 aaPredicted RBP9.31□□□□□ -0.92
MSH2-202ENST00000406134 KBTBD8Q8NFY9 601 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 WDR36Q8NI36 951 aaKnown RBP9.31□□□□□ -0.92
MSH2-202ENST00000406134 C9orf43Q8TAL5 461 aaPredicted RBP9.31□□□□□ -0.92
MSH2-202ENST00000406134 KCNS3Q9BQ31 491 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 UCK2Q9BZX2 261 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 MCOLN1Q9GZU1 580 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 MIXL1Q9H2W2 232 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 KLHL31Q9H511 634 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 PELI2Q9HAT8 420 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 ERVK13-1Q9NX77 482 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 KCNE3Q9Y6H6 103 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 SCN3AQ9NY46 2000 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 SLC35F4A4IF30 521 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 KIAA0355O15063 1070 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 PI15O43692 258 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 HOXD12P35452 270 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 ETV5P41161 510 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 ETV1P50549 477 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 CDC42P60953 191 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 PIN1Q13526 163 aaPredicted RBP9.31□□□□□ -0.92
MSH2-202ENST00000406134 BAK1Q16611 211 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 SLC25A30Q5SVS4 291 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 METRNLQ641Q3 311 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 ACSM5Q6NUN0 579 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 PODNL1Q6PEZ8 512 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 CD300LDQ6UXZ3 194 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 SLC30A8Q8IWU4 369 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 TBC1D19Q8N5T2 526 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 ZNF557Q8N988 423 aaPredicted RBP9.31□□□□□ -0.92
MSH2-202ENST00000406134 IL17RCQ8NAC3 791 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 SPPL3Q8TCT6 385 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms