RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 MED16Q9Y2X0 877 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 TCRBV5S4A2TA0A5A2 114 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 FAM196BA6NMK8 535 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 MRPS14O60783 128 aaKnown RBP2.61□□□□□ -1.99
CHD9-202ENST00000398510 MED6O75586 246 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 SGPL1O95470 568 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 NAT1P18440 290 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 NT5EP21589 574 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 RPS3P23396 243 aaKnown RBP eCLIP2.61□□□□□ -1.99
CHD9-202ENST00000398510 ADH6P28332 368 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 MSX1P28360 303 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 ARL3P36405 182 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 SERPINF1P36955 418 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 GPR3P46089 330 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 MTM1Q13496 603 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 TLR1Q15399 786 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 FAM209BQ5JX69 171 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 TMEM225Q6GV28 225 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 RAB12Q6IQ22 244 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 LPCAT3Q6P1A2 487 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 C22orf39Q6P5X5 142 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 OPN5Q6U736 354 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 DPY19L3Q6ZPD9 716 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 ZNF595Q8IYB9 648 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 C4orf33Q8N1A6 199 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 DNAJC22Q8N4W6 341 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 TERB2Q8NHR7 220 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 SCGB1C1Q8TD33 95 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 SLC35C1Q96A29 364 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 IGSF21Q96ID5 467 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 ALPK1Q96QP1 1244 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 RANBP9Q96S59 729 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 UTP23Q9BRU9 249 aaKnown RBP2.61□□□□□ -1.99
CHD9-202ENST00000398510 ZNF471Q9BX82 626 aaPredicted RBP2.61□□□□□ -1.99
CHD9-202ENST00000398510 SLC22A4Q9H015 551 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 TNKS2Q9H2K2 1166 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 ADAMTS10Q9H324 1103 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 PLEKHA3Q9HB20 300 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 TNFRSF10DQ9UBN6 386 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 VPS29Q9UBQ0 182 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 A4GNTQ9UNA3 340 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 A0A1W2PPL8 197 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 SMLR1H3BR10 107 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 M0QZ24 198 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 AXIN1O15169 862 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 RP2O75695 350 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 HLA-DPB1P04440 258 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 HOXD4P09016 255 aaPredicted RBP2.61□□□□□ -1.99
CHD9-202ENST00000398510 SRCP12931 536 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 HNRNPH3P31942 346 aaKnown RBP2.61□□□□□ -1.99
CHD9-202ENST00000398510 FRKP42685 505 aaPredicted RBP2.61□□□□□ -1.99
CHD9-202ENST00000398510 FMO1Q01740 532 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 TAF10Q12962 218 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 COL28A1Q2UY09 1125 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 FLYWCH1Q4VC44 716 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 FRMD7Q6ZUT3 714 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 ASPGQ86U10 573 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 GALNT4Q8N4A0 578 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 FAM46DQ8NEK8 389 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 ACVR1CQ8NER5 493 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 SLC13A3Q8WWT9 602 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 SULT4A1Q9BR01 284 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 DPEP3Q9H4B8 488 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 GPN2Q9H9Y4 310 aaPredicted RBP2.61□□□□□ -1.99
CHD9-202ENST00000398510 RIMKLBQ9ULI2 386 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 RNF150Q9ULK6 438 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 ERVK-19Q9WJR5 959 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 CLCA1A8K7I4 914 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 HAS3O00219 553 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 UQCRC2P22695 453 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 PSMB4P28070 264 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 CXCL12P48061 93 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 PREPP48147 710 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 TAS2R20P59543 309 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 BTN3A2P78410 334 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 CHIT1Q13231 466 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 COTL1Q14019 142 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 P2RY8Q86VZ1 359 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 TMEM139Q8IV31 216 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 STEAP2Q8NFT2 490 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 OR6K6Q8NGW6 343 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 SH3RF2Q8TEC5 729 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 SLC44A1Q8WWI5 657 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 THAP4Q8WY91 577 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 MR1Q95460 341 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 RTP4Q96DX8 246 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 PGLYRP2Q96PD5 576 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 BHLHE41Q9C0J9 482 aaPredicted RBP2.61□□□□□ -1.99
CHD9-202ENST00000398510 INPP5EQ9NRR6 644 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 ADAM29Q9UKF5 820 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 TLCD2A6NGC4 264 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 ZNF587BE7ETH6 402 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 STMND1H3BQB6 276 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 PAK4O96013 591 aaPredicted RBP2.61□□□□□ -1.99
CHD9-202ENST00000398510 PAHP00439 452 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 HMGA2P52926 109 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 ART1P52961 327 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 ZNF844Q08AG5 666 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 MEF2DQ14814 521 aa2.61□□□□□ -1.99
CHD9-202ENST00000398510 TRAM2Q15035 370 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms