RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 LRRC15Q8TF66 581 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 NABP1Q96AH0 204 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 ANKRD9Q96BM1 317 aaPredicted RBP2.26□□□□□ -2.05
CD47-203ENST00000398258 CCDC51Q96ER9 411 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 ATXN7L3BQ96GX2 97 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 LINC00479Q96M42 142 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 ZNF599Q96NL3 588 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 SYT11Q9BT88 431 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 MCRIP2Q9BUT9 160 aaKnown RBP2.26□□□□□ -2.05
CD47-203ENST00000398258 FUNDC2Q9BWH2 189 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 DGCR6LQ9BY27 220 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 NMNAT2Q9BZQ4 307 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 TEX10Q9NXF1 929 aaPredicted RBP2.26□□□□□ -2.05
CD47-203ENST00000398258 TAS2R3Q9NYW6 316 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 THYN1Q9P016 225 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 ACTR3BQ9P1U1 418 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 HOOK1Q9UJC3 728 aaKnown RBP2.26□□□□□ -2.05
CD47-203ENST00000398258 SPATA2Q9UM82 520 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 ATG4BQ9Y4P1 393 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 FAM205AQ6ZU69 1335 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 IGHV3OR16-10A0A075B7F0 116 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 A0A1W2PPR1 153 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 MEI4A8MW99 385 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 BUB1O43683 1085 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 IDH3BO43837 385 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 CSO75390 466 aaKnown RBP2.25□□□□□ -2.05
CD47-203ENST00000398258 REC8O95072 547 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 TRIM16O95361 564 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 DUS4LO95620 317 aaKnown RBP2.25□□□□□ -2.05
CD47-203ENST00000398258 TGFAP01135 160 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 LYNP07948 512 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 CCDC159P0C7I6 412 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 GP9P14770 177 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 FOSL2P15408 326 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 ARF4P18085 180 aaPredicted RBP2.25□□□□□ -2.05
CD47-203ENST00000398258 AOC1P19801 751 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 RPA1P27694 616 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 PTPN4P29074 926 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 MTIF2P46199 727 aaKnown RBP2.25□□□□□ -2.05
CD47-203ENST00000398258 TKTL1P51854 596 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 FKBP3Q00688 224 aaKnown RBP2.25□□□□□ -2.05
CD47-203ENST00000398258 RBBP4Q09028 425 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 DPYSQ14117 519 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 ZNF146Q15072 292 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 NECTIN1Q15223 517 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 P2RY14Q15391 338 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 INAQ16352 499 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 SHROOM1Q2M3G4 852 aaPredicted RBP2.25□□□□□ -2.05
CD47-203ENST00000398258 MS4A18Q3C1V0 323 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 POM121L1PQ3SYA9 428 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 ACSF3Q4G176 576 aaPredicted RBP2.25□□□□□ -2.05
CD47-203ENST00000398258 IL23RQ5VWK5 629 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 LIPJQ5W064 366 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 ZNF772Q68DY9 489 aaPredicted RBP2.25□□□□□ -2.05
CD47-203ENST00000398258 OR6B2Q6IFH4 312 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 ZCCHC12Q6PEW1 402 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 WDR88Q6ZMY6 472 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 Q6ZRG5 221 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 Q71RC1 249 aaPredicted RBP2.25□□□□□ -2.05
CD47-203ENST00000398258 LRRTM1Q86UE6 522 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 METTL4Q8N3J2 472 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 TEX9Q8N6V9 391 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 AQP11Q8NBQ7 271 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 LEMD2Q8NC56 503 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 OR56B1Q8NGI3 324 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 OR4F5Q8NH21 305 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 RDH11Q8TC12 318 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 SSC4DQ8WTU2 575 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 MRPL24Q96A35 216 aaKnown RBP2.25□□□□□ -2.05
CD47-203ENST00000398258 TMEM45BQ96B21 275 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 CXorf58Q96LI9 332 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 ACCSQ96QU6 501 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 FAM124BQ9H5Z6 455 aaPredicted RBP2.25□□□□□ -2.05
CD47-203ENST00000398258 ECT2Q9H8V3 914 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 PLEKHA3Q9HB20 300 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 UBE2TQ9NPD8 197 aaPredicted RBP2.25□□□□□ -2.05
CD47-203ENST00000398258 HPS4Q9NQG7 708 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 GDF3Q9NR23 364 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 FAM212BQ9NTI7 297 aaPredicted RBP2.25□□□□□ -2.05
CD47-203ENST00000398258 THEGQ9P2T0 379 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 LHX3Q9UBR4 397 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 TUBGCP4Q9UGJ1 667 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 BAIAP2L1Q9UHR4 511 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 NIP7Q9Y221 180 aaKnown RBP eCLIP2.25□□□□□ -2.05
CD47-203ENST00000398258 ENTPD4Q9Y227 616 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 KLHDC2Q9Y2U9 406 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 CLCA3PQ9Y6N3 262 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 NCAPD2Q15021 1401 aa2.25□□□□□ -2.05
CD47-203ENST00000398258 IGLV4-3A0A075B6K6 122 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 A0A0A6YYD4 124 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 LOC390937A0A1W2PQ73 354 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 E9PMD0 336 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 SGK494L7N484 410 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 FBP2O00757 339 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 B4GAT1O43505 415 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 GMNNO75496 209 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 STAM2O75886 525 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 NDUFA7O95182 113 aa2.24□□□□□ -2.05
CD47-203ENST00000398258 TRIM49P0CI25 452 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms