RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 TMEM107Q6UX40 140 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 CEACAM20Q6UY09 585 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 COX15Q7KZN9 410 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 DNAJB8Q8NHS0 232 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 ADAMTS18Q8TE60 1221 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 KAT2AQ92830 837 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 TRIM4Q9C037 500 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 ANKRA2Q9H9E1 313 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 ZNF282Q9UDV7 671 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-204ENST00000397443 PRPF19Q9UMS4 504 aaKnown RBP19.9■□□□□ 0.78
CPNE1-204ENST00000397443 CCDC187A0A096LP49 1063 aa19.89■□□□□ 0.77
CPNE1-204ENST00000397443 PRORSD1PA6NEY8 169 aa19.89■□□□□ 0.77
CPNE1-204ENST00000397443 CLIC1O00299 241 aa19.89■□□□□ 0.77
CPNE1-204ENST00000397443 TM4SF5O14894 197 aa19.89■□□□□ 0.77
CPNE1-204ENST00000397443 PLD2O14939 933 aa19.89■□□□□ 0.77
CPNE1-204ENST00000397443 BMP10O95393 424 aa19.89■□□□□ 0.77
CPNE1-204ENST00000397443 MRPS35P82673 323 aaKnown RBP19.89■□□□□ 0.77
CPNE1-204ENST00000397443 TARDBPQ13148 414 aaKnown RBP eCLIP19.89■□□□□ 0.77
CPNE1-204ENST00000397443 ZC3H7AQ8IWR0 971 aaKnown RBP19.89■□□□□ 0.77
CPNE1-204ENST00000397443 FBXW8Q8N3Y1 598 aa19.89■□□□□ 0.77
CPNE1-204ENST00000397443 TRIML2Q8N7C3 387 aa19.89■□□□□ 0.77
CPNE1-204ENST00000397443 TPT1P8Q9HAU6 139 aa19.89■□□□□ 0.77
CPNE1-204ENST00000397443 NEUROD4Q9HD90 331 aa19.89■□□□□ 0.77
CPNE1-204ENST00000397443 LANCL2Q9NS86 450 aa19.89■□□□□ 0.77
CPNE1-204ENST00000397443 SIRT3Q9NTG7 399 aaPredicted RBP19.89■□□□□ 0.77
CPNE1-204ENST00000397443 USP22Q9UPT9 525 aa19.89■□□□□ 0.77
CPNE1-204ENST00000397443 SATB2Q9UPW6 733 aa19.89■□□□□ 0.77
CPNE1-204ENST00000397443 CCDC88CQ9P219 2028 aa19.89■□□□□ 0.77
CPNE1-204ENST00000397443 RNF103-CHMP3A0A140T963 221 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 MEN1O00255 615 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 CDK4P11802 303 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 ERFP50548 548 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 PIGGQ5H8A4 983 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 MLIPQ5VWP3 458 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 FAM199XQ6PEV8 388 aaPredicted RBP19.88■□□□□ 0.77
CPNE1-204ENST00000397443 TMEM151BQ8IW70 566 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 C10orf111Q8N326 155 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 OR10A6Q8NH74 314 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 GOT1L1Q8NHS2 421 aaPredicted RBP19.88■□□□□ 0.77
CPNE1-204ENST00000397443 PTCHD1Q96NR3 888 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 ECSITQ9BQ95 431 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 CPPED1Q9BRF8 314 aaPredicted RBP19.88■□□□□ 0.77
CPNE1-204ENST00000397443 IFT80Q9P2H3 777 aaPredicted RBP19.88■□□□□ 0.77
CPNE1-204ENST00000397443 SLC7A8Q9UHI5 535 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 C15orf38-AP3S2A0A0A6YYH1 394 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 OR10H2O60403 315 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 CTNSO60931 367 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 CEACAM1P13688 526 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 NT5EP21589 574 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 PPP2R1BP30154 601 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 RORAP35398 523 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 MC3RP41968 323 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 PRKAG1P54619 331 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 LIPEQ05469 1076 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 CEBPEQ15744 281 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 SAMD4BQ5PRF9 694 aaKnown RBP19.88■□□□□ 0.77
CPNE1-204ENST00000397443 ARPINQ7Z6K5 226 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 LAPTM4BQ86VI4 370 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 OR8J3Q8NGG0 315 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 ALOXE3Q9BYJ1 711 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 MKKSQ9NPJ1 570 aaPredicted RBP19.88■□□□□ 0.77
CPNE1-204ENST00000397443 NECTIN3Q9NQS3 549 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 PRDM9Q9NQV7 894 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 ABCD2Q9UBJ2 740 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 CDV3Q9UKY7 258 aaKnown RBP19.88■□□□□ 0.77
CPNE1-204ENST00000397443 MKL2Q9ULH7 1088 aa19.88■□□□□ 0.77
CPNE1-204ENST00000397443 DKK1O94907 266 aa19.87■□□□□ 0.77
CPNE1-204ENST00000397443 RAB15P59190 212 aa19.87■□□□□ 0.77
CPNE1-204ENST00000397443 TP53BP2Q13625 1128 aa19.87■□□□□ 0.77
CPNE1-204ENST00000397443 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.87■□□□□ 0.772e-6■■□□□ 13.7
CPNE1-204ENST00000397443 ZNF385CQ66K41 422 aaPredicted RBP19.87■□□□□ 0.77
CPNE1-204ENST00000397443 SAMD14Q8IZD0 417 aaPredicted RBP19.87■□□□□ 0.77
CPNE1-204ENST00000397443 GALNT6Q8NCL4 622 aa19.87■□□□□ 0.77
CPNE1-204ENST00000397443 ZFP90Q8TF47 636 aa19.87■□□□□ 0.77
CPNE1-204ENST00000397443 TSLPQ969D9 159 aa19.87■□□□□ 0.77
CPNE1-204ENST00000397443 OR1F2PQ96R84 312 aa19.87■□□□□ 0.77
CPNE1-204ENST00000397443 MMADHCQ9H3L0 296 aaPredicted RBP19.87■□□□□ 0.77
CPNE1-204ENST00000397443 SOX17Q9H6I2 414 aaPredicted RBP19.87■□□□□ 0.77
CPNE1-204ENST00000397443 A8MUI8 341 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 EVPLLA8MZ36 301 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 H0YHG0 523 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 NME6O75414 186 aaPredicted RBP19.86■□□□□ 0.77
CPNE1-204ENST00000397443 ZCCHC18P0CG32 403 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 UQCRC2P22695 453 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 CCT3P49368 545 aaKnown RBP19.86■□□□□ 0.77
CPNE1-204ENST00000397443 RPS26P62854 115 aaKnown RBP19.86■□□□□ 0.77
CPNE1-204ENST00000397443 OCA2Q04671 838 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 MLC1Q15049 377 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 PGM2L1Q6PCE3 622 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 STT3BQ8TCJ2 826 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 MR1Q95460 341 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 PHF12Q96QT6 1004 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 TAAR9Q96RI9 348 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 ALG2Q9H553 416 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 IFNA16P05015 189 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 KLK3P07288 261 aaPredicted RBP19.86■□□□□ 0.77
CPNE1-204ENST00000397443 GSK3BP49841 420 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 EFNA3P52797 238 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 HSD17B7P56937 341 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 CORO7P57737 925 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms