RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 PIK3IP1Q96FE7 263 aa7.69□□□□□ -1.18
SCFD1-202ENST00000396629 FBXL20Q96IG2 436 aa7.69□□□□□ -1.18
SCFD1-202ENST00000396629 SIGLEC10Q96LC7 697 aa7.69□□□□□ -1.18
SCFD1-202ENST00000396629 SERPINB12Q96P63 405 aa7.69□□□□□ -1.18
SCFD1-202ENST00000396629 GNRHR2Q96P88 292 aa7.69□□□□□ -1.18
SCFD1-202ENST00000396629 DGAT2Q96PD7 388 aa7.69□□□□□ -1.18
SCFD1-202ENST00000396629 TUBA1CQ9BQE3 449 aa7.69□□□□□ -1.18
SCFD1-202ENST00000396629 COPS7BQ9H9Q2 264 aaPredicted RBP7.69□□□□□ -1.18
SCFD1-202ENST00000396629 XAB2Q9HCS7 855 aaKnown RBP7.69□□□□□ -1.18
SCFD1-202ENST00000396629 ZNF701Q9NV72 531 aaPredicted RBP7.69□□□□□ -1.18
SCFD1-202ENST00000396629 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.69□□□□□ -1.185e-6■■■■□ 22.2
SCFD1-202ENST00000396629 ZNF226Q9NYT6 803 aa7.69□□□□□ -1.18
SCFD1-202ENST00000396629 CUBNO60494 3623 aa7.69□□□□□ -1.18
SCFD1-202ENST00000396629 SONP18583 2426 aaKnown RBP7.68□□□□□ -1.18
SCFD1-202ENST00000396629 TP53I11O14683 189 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 FGF17O60258 216 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 TMCC2O75069 709 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 AHSGP02765 367 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 CCDC175P0C221 793 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 TGM3Q08188 693 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 TNK1Q13470 666 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 GAB1Q13480 694 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 WIPI1Q5MNZ9 446 aaPredicted RBP7.68□□□□□ -1.18
SCFD1-202ENST00000396629 BICRALQ6AI39 1079 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 ZNF793Q6ZN11 406 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 SLC29A4Q7RTT9 530 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 UBE3DQ7Z6J8 389 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 GALNT7Q86SF2 657 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 HIPK1Q86Z02 1210 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 MEIOBQ8N635 442 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 BBOF1Q8ND07 529 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 INTS12Q96CB8 462 aaKnown RBP7.68□□□□□ -1.18
SCFD1-202ENST00000396629 TMEM41AQ96HV5 264 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 RILPQ96NA2 401 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 ROGDIQ9GZN7 287 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 WWTR1Q9GZV5 400 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 ACBD3Q9H3P7 528 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 ADGRE2Q9UHX3 823 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 PACSIN3Q9UKS6 424 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 ZNF490Q9ULM2 529 aaPredicted RBP7.68□□□□□ -1.18
SCFD1-202ENST00000396629 MED12Q93074 2177 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 OR6C76A6NM76 312 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 CAPN14A8MX76 684 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 MSTNO14793 375 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 DYRK3O43781 588 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 TNFSF13O75888 250 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 ATP5A1P25705 553 aaKnown RBP7.68□□□□□ -1.18
SCFD1-202ENST00000396629 PTPN6P29350 595 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 ANP32AP39687 249 aaKnown RBP7.68□□□□□ -1.18
SCFD1-202ENST00000396629 SLC6A12P48065 614 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 KCNC1P48547 511 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 HNMTP50135 292 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 PGGT1BP53609 377 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 SLC37A1P57057 533 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 FAM27E3Q08E93 113 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 GPS1Q13098 491 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 EBPQ15125 230 aaKnown RBP7.68□□□□□ -1.18
SCFD1-202ENST00000396629 TRIP13Q15645 432 aaPredicted RBP7.68□□□□□ -1.18
SCFD1-202ENST00000396629 PLEKHM3Q6ZWE6 761 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 PACS2Q86VP3 889 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 TAGAPQ8N103 731 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 TXLNBQ8N3L3 684 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 RNF10Q8N5U6 811 aaKnown RBP7.68□□□□□ -1.18
SCFD1-202ENST00000396629 FAM83FQ8NEG4 500 aaPredicted RBP7.68□□□□□ -1.18
SCFD1-202ENST00000396629 MAIP1Q8WWC4 291 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 ANKRD7Q92527 254 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 PPWD1Q96BP3 646 aaKnown RBP7.68□□□□□ -1.18
SCFD1-202ENST00000396629 KCNC2Q96PR1 638 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 HS3ST6Q96QI5 342 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 F2RL3Q96RI0 385 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 TBCDQ9BTW9 1192 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 KLHL28Q9NXS3 571 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 CLCF1Q9UBD9 225 aa7.68□□□□□ -1.18
SCFD1-202ENST00000396629 IQANK1A0A1B0GTG1 560 aa7.67□□□□□ -1.18
SCFD1-202ENST00000396629 SNPHO15079 494 aa7.67□□□□□ -1.18
SCFD1-202ENST00000396629 PRAMEF4O60810 478 aa7.67□□□□□ -1.18
SCFD1-202ENST00000396629 WDR47O94967 919 aa7.67□□□□□ -1.18
SCFD1-202ENST00000396629 SCELO95171 688 aa7.67□□□□□ -1.18
SCFD1-202ENST00000396629 CLPSP04118 112 aa7.67□□□□□ -1.18
SCFD1-202ENST00000396629 NID1P14543 1247 aa7.67□□□□□ -1.18
SCFD1-202ENST00000396629 CASP3P42574 277 aa7.67□□□□□ -1.18
SCFD1-202ENST00000396629 MASP1P48740 699 aa7.67□□□□□ -1.18
SCFD1-202ENST00000396629 VPS41P49754 854 aa7.67□□□□□ -1.18
SCFD1-202ENST00000396629 FBXW4P57775 412 aa7.67□□□□□ -1.18
SCFD1-202ENST00000396629 RPS6KA2Q15349 733 aa7.67□□□□□ -1.18
SCFD1-202ENST00000396629 SPRED3Q2MJR0 410 aa7.67□□□□□ -1.18
SCFD1-202ENST00000396629 PRAMEF9Q5VWM5 478 aa7.67□□□□□ -1.18
SCFD1-202ENST00000396629 TIGD3Q6B0B8 471 aa7.67□□□□□ -1.18
SCFD1-202ENST00000396629 ADNP2Q6IQ32 1131 aa7.67□□□□□ -1.18
SCFD1-202ENST00000396629 SCIMPQ6UWF3 145 aa7.67□□□□□ -1.18
SCFD1-202ENST00000396629 RNF111Q6ZNA4 994 aa7.67□□□□□ -1.18
SCFD1-202ENST00000396629 YRDCQ86U90 279 aaKnown RBP7.67□□□□□ -1.18
SCFD1-202ENST00000396629 CNTN4Q8IWV2 1026 aa7.67□□□□□ -1.18
SCFD1-202ENST00000396629 OR4N5Q8IXE1 308 aa7.67□□□□□ -1.18
SCFD1-202ENST00000396629 ACOT4Q8N9L9 421 aa7.67□□□□□ -1.18
SCFD1-202ENST00000396629 SRFBP1Q8NEF9 429 aaKnown RBP7.67□□□□□ -1.18
SCFD1-202ENST00000396629 TP53INP1Q96A56 240 aa7.67□□□□□ -1.18
SCFD1-202ENST00000396629 RBM18Q96H35 190 aaKnown RBP7.67□□□□□ -1.18
SCFD1-202ENST00000396629 GAL3ST4Q96RP7 486 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms