RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 CERS1P27544 350 aa18.19■□□□□ 0.5
LMNB1-202ENST00000395354 NTSP30990 170 aa18.19■□□□□ 0.5
LMNB1-202ENST00000395354 NKG7Q16617 165 aa18.19■□□□□ 0.5
LMNB1-202ENST00000395354 ZNF630Q2M218 657 aaPredicted RBP18.19■□□□□ 0.5
LMNB1-202ENST00000395354 RBM44Q6ZP01 1051 aaKnown RBP18.19■□□□□ 0.5
LMNB1-202ENST00000395354 ABHD13Q7L211 337 aa18.19■□□□□ 0.5
LMNB1-202ENST00000395354 EPHX4Q8IUS5 362 aa18.19■□□□□ 0.5
LMNB1-202ENST00000395354 CARFQ8N187 725 aa18.19■□□□□ 0.5
LMNB1-202ENST00000395354 CLEC4FQ8N1N0 589 aa18.19■□□□□ 0.5
LMNB1-202ENST00000395354 MARVELD2Q8N4S9 558 aa18.19■□□□□ 0.5
LMNB1-202ENST00000395354 GATA6Q92908 595 aa18.19■□□□□ 0.5
LMNB1-202ENST00000395354 FCRL4Q96PJ5 515 aa18.19■□□□□ 0.5
LMNB1-202ENST00000395354 PHF11Q9UIL8 331 aa18.19■□□□□ 0.5
LMNB1-202ENST00000395354 OAZ3Q9UMX2 235 aa18.19■□□□□ 0.5
LMNB1-202ENST00000395354 ATG4BQ9Y4P1 393 aa18.19■□□□□ 0.5
LMNB1-202ENST00000395354 AP4B1Q9Y6B7 739 aa18.19■□□□□ 0.5
LMNB1-202ENST00000395354 KNTC1P50748 2209 aa18.19■□□□□ 0.5
LMNB1-202ENST00000395354 RNF103-CHMP3A0A140T963 221 aa18.18■□□□□ 0.5
LMNB1-202ENST00000395354 SOCS2O14508 198 aa18.18■□□□□ 0.5
LMNB1-202ENST00000395354 TOX3O15405 576 aaPredicted RBP18.18■□□□□ 0.5
LMNB1-202ENST00000395354 ZNF888P0CJ79 500 aaPredicted RBP18.18■□□□□ 0.5
LMNB1-202ENST00000395354 ETFAP13804 333 aa18.18■□□□□ 0.5
LMNB1-202ENST00000395354 MAGEA2P43356 314 aa18.18■□□□□ 0.5
LMNB1-202ENST00000395354 MRPS35P82673 323 aaKnown RBP18.18■□□□□ 0.5
LMNB1-202ENST00000395354 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.18■□□□□ 0.5
LMNB1-202ENST00000395354 LRRC23Q53EV4 343 aaPredicted RBP18.18■□□□□ 0.5
LMNB1-202ENST00000395354 COX20Q5RI15 118 aa18.18■□□□□ 0.5
LMNB1-202ENST00000395354 PHF19Q5T6S3 580 aa18.18■□□□□ 0.5
LMNB1-202ENST00000395354 SLC48A1Q6P1K1 146 aa18.18■□□□□ 0.5
LMNB1-202ENST00000395354 ANGPTL8Q6UXH0 198 aa18.18■□□□□ 0.5
LMNB1-202ENST00000395354 CCDC80Q76M96 950 aa18.18■□□□□ 0.5
LMNB1-202ENST00000395354 PRSS42Q7Z5A4 293 aa18.18■□□□□ 0.5
LMNB1-202ENST00000395354 SLITRK4Q8IW52 837 aa18.18■□□□□ 0.5
LMNB1-202ENST00000395354 CBR4Q8N4T8 237 aa18.18■□□□□ 0.5
LMNB1-202ENST00000395354 ASPSCR1Q9BZE9 553 aa18.18■□□□□ 0.5
LMNB1-202ENST00000395354 SIRT3Q9NTG7 399 aaPredicted RBP18.18■□□□□ 0.5
LMNB1-202ENST00000395354 SEMA5BQ9P283 1151 aa18.18■□□□□ 0.5
LMNB1-202ENST00000395354 CES1P1Q9UKY3 287 aa18.18■□□□□ 0.5
LMNB1-202ENST00000395354 PSME2Q9UL46 239 aa18.18■□□□□ 0.5
LMNB1-202ENST00000395354 DMXL1Q9Y485 3027 aa18.18■□□□□ 0.5
LMNB1-202ENST00000395354 DCDC2BA2VCK2 349 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 C7orf72A4D263 438 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 MAGEA13PA6NCF6 341 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 MYO1GB0I1T2 1018 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 H0YGG7 62 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 PRAMEF10O60809 474 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 ZBTB11O95625 1053 aaPredicted RBP18.17■□□□□ 0.5
LMNB1-202ENST00000395354 AIFM1O95831 613 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 NUDT7P0C024 238 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 PRIM2P49643 509 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 SEPHS1P49903 392 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 CLCN2P51788 898 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 ARF3P61204 181 aaPredicted RBP18.17■□□□□ 0.5
LMNB1-202ENST00000395354 ZFP36L1Q07352 338 aaKnown RBP18.17■□□□□ 0.5
LMNB1-202ENST00000395354 NRF1Q16656 503 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 ARHGAP22Q7Z5H3 698 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 RNF130Q86XS8 419 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 TBC1D20Q96BZ9 403 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 CCDC74BQ96LY2 380 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 AMDHD1Q96NU7 426 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 NTN4Q9HB63 628 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 GIMAP4Q9NUV9 329 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 ADPRHL2Q9NX46 363 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 THUMPD1Q9NXG2 353 aaKnown RBP18.17■□□□□ 0.5
LMNB1-202ENST00000395354 MS4A12Q9NXJ0 267 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 FBXW2Q9UKT8 454 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 ACSL6Q9UKU0 697 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 SNX8Q9Y5X2 465 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 UPK1AO00322 258 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 TXNDC9O14530 226 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 P2RX6O15547 441 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 CST1P01037 141 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 MT-ND1P03886 318 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 SEMG1P04279 462 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 ARAFP10398 606 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 ARL4DP49703 201 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 EEF1A2Q05639 463 aaKnown RBP18.17■□□□□ 0.5
LMNB1-202ENST00000395354 MYBPC3Q14896 1274 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 C16orf72Q14CZ0 275 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 CEBPEQ15744 281 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 CDCP2Q5VXM1 449 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 TMEM64Q6YI46 380 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 B3GNT8Q7Z7M8 397 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 SAMD14Q8IZD0 417 aaPredicted RBP18.17■□□□□ 0.5
LMNB1-202ENST00000395354 SVOPLQ8N434 492 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 C19orf47Q8N9M1 422 aaKnown RBP18.17■□□□□ 0.5
LMNB1-202ENST00000395354 RCBTB1Q8NDN9 531 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 OR5AK3PQ8NH89 298 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 KLHL6Q8WZ60 621 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 TCTN2Q96GX1 697 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 VPS50Q96JG6 964 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 BBS4Q96RK4 519 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 GLIPR2Q9H4G4 154 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 IL1RAPQ9NPH3 570 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 SEMA3GQ9NS98 782 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 C5AR2Q9P296 337 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 ENTPD4Q9Y227 616 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 MAP4K5Q9Y4K4 846 aa18.17■□□□□ 0.5
LMNB1-202ENST00000395354 LOC105369274A0A096LPK9 316 aa18.16■□□□□ 0.5
LMNB1-202ENST00000395354 LOC102723532A0A0G2JNH3 316 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms