RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 ZNF542PQ5EBM4 170 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 SLC48A1Q6P1K1 146 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 ASPGQ86U10 573 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 PHF10Q8WUB8 498 aaKnown RBP17.5■□□□□ 0.39
STRADB-202ENST00000392249 PROX1Q92786 737 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 HRASLS5Q96KN8 279 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 COL21A1Q96P44 957 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 DOK1Q99704 481 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 YIPF4Q9BSR8 244 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 ZSCAN32Q9NX65 697 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 CES1P1Q9UKY3 287 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 NAALAD2Q9Y3Q0 740 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 PCDHGA6Q9Y5G7 932 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 HS3ST3A1Q9Y663 406 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 OR6C74A6NCV1 312 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 PROM1O43490 865 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 PCDHGA12O60330 932 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 PDE9AO76083 593 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 POU2F1P14859 743 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 LIMS1P48059 325 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 RGS1Q08116 209 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 TGM3Q08188 693 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 GTF2IRD2BQ6EKJ0 949 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 FBXO42Q6P3S6 717 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 TMEM107Q6UX40 140 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 OLIG3Q7RTU3 272 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 GTF2IRD2Q86UP8 949 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 SFTPA2Q8IWL1 248 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 GAL3ST3Q96A11 431 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 SEMA3GQ9NS98 782 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 SEC14L3Q9UDX4 400 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 GON4LQ3T8J9 2241 aa17.5■□□□□ 0.39
STRADB-202ENST00000392249 A0A0J9YVX5 310 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 OR2A25A4D2G3 310 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 E9PQ18 207 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 CTSVO60911 334 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 NR2F1P10589 423 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 LASP1Q14847 261 aaKnown RBP17.49■□□□□ 0.39
STRADB-202ENST00000392249 ABI3BPQ7Z7G0 1075 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 ENTHD1Q8IYW4 607 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 ZCCHC10Q8TBK6 192 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 TOE1Q96GM8 510 aaKnown RBP17.49■□□□□ 0.39
STRADB-202ENST00000392249 ZNF607Q96SK3 696 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 ERVK-18Q9QC07 812 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 PRAMEF26H0Y7S4 382 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 FFAR1O14842 300 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 VIPP01282 170 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 HMGN2P05204 90 aaKnown RBP17.49■□□□□ 0.39
STRADB-202ENST00000392249 CELA2BP08218 269 aaPredicted RBP17.49■□□□□ 0.39
STRADB-202ENST00000392249 SLC35G6P0C7Q6 338 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 JUNDP17535 347 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 PCMT1P22061 227 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 KRT20P35900 424 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 RABIFP47224 123 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 NUP107P57740 925 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 TMEM64Q6YI46 380 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 VANGL1Q8TAA9 524 aaPredicted RBP17.49■□□□□ 0.39
STRADB-202ENST00000392249 CNDP2Q96KP4 475 aaKnown RBP17.49■□□□□ 0.39
STRADB-202ENST00000392249 ANKRA2Q9H9E1 313 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 SCN3BQ9NY72 215 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 ACTR10Q9NZ32 417 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 POFUT2Q9Y2G5 429 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 TPRKBQ9Y3C4 175 aa17.49■□□□□ 0.39
STRADB-202ENST00000392249 P2RX6O15547 441 aa17.48■□□□□ 0.39
STRADB-202ENST00000392249 NOL3O60936 208 aaKnown RBP17.48■□□□□ 0.39
STRADB-202ENST00000392249 WBP4O75554 376 aaKnown RBP17.48■□□□□ 0.39
STRADB-202ENST00000392249 CCNB2O95067 398 aa17.48■□□□□ 0.39
STRADB-202ENST00000392249 TNFP01375 233 aa17.48■□□□□ 0.39
STRADB-202ENST00000392249 CSNK2A2P19784 350 aaPredicted RBP17.48■□□□□ 0.39
STRADB-202ENST00000392249 KHKP50053 298 aa17.48■□□□□ 0.39
STRADB-202ENST00000392249 HMGA2P52926 109 aa17.48■□□□□ 0.39
STRADB-202ENST00000392249 CXCR4P61073 352 aa17.48■□□□□ 0.39
STRADB-202ENST00000392249 SLC35A2P78381 396 aa17.48■□□□□ 0.39
STRADB-202ENST00000392249 TUBA3CQ13748 450 aa17.48■□□□□ 0.39
STRADB-202ENST00000392249 PROX2Q3B8N5 592 aa17.48■□□□□ 0.39
STRADB-202ENST00000392249 HMGN2P46Q86SG4 172 aa17.48■□□□□ 0.39
STRADB-202ENST00000392249 TAGAPQ8N103 731 aa17.48■□□□□ 0.39
STRADB-202ENST00000392249 ZNF540Q8NDQ6 660 aa17.48■□□□□ 0.39
STRADB-202ENST00000392249 UTP15Q8TED0 518 aaKnown RBP17.48■□□□□ 0.39
STRADB-202ENST00000392249 APH1BQ8WW43 257 aa17.48■□□□□ 0.39
STRADB-202ENST00000392249 MUL1Q969V5 352 aa17.48■□□□□ 0.39
STRADB-202ENST00000392249 GTPBP3Q969Y2 492 aaKnown RBP17.48■□□□□ 0.39
STRADB-202ENST00000392249 ALPK1Q96QP1 1244 aa17.48■□□□□ 0.39
STRADB-202ENST00000392249 OR2A5Q96R48 311 aa17.48■□□□□ 0.39
STRADB-202ENST00000392249 WFDC6Q9BQY6 131 aa17.48■□□□□ 0.39
STRADB-202ENST00000392249 DUSP21Q9H596 190 aa17.48■□□□□ 0.39
STRADB-202ENST00000392249 POLMQ9NP87 494 aaPredicted RBP17.48■□□□□ 0.39
STRADB-202ENST00000392249 LYARQ9NX58 379 aaKnown RBP17.48■□□□□ 0.39
STRADB-202ENST00000392249 WARS2Q9UGM6 360 aaKnown RBP17.48■□□□□ 0.39
STRADB-202ENST00000392249 A0A1W2PPW3 197 aa17.47■□□□□ 0.39
STRADB-202ENST00000392249 FAM227AF5H4B4 570 aa17.47■□□□□ 0.39
STRADB-202ENST00000392249 FAM20BO75063 409 aa17.47■□□□□ 0.39
STRADB-202ENST00000392249 SEMA7AO75326 666 aa17.47■□□□□ 0.39
STRADB-202ENST00000392249 INMTO95050 263 aa17.47■□□□□ 0.39
STRADB-202ENST00000392249 GLULP15104 373 aa17.47■□□□□ 0.39
STRADB-202ENST00000392249 PPP2R1BP30154 601 aa17.47■□□□□ 0.39
STRADB-202ENST00000392249 KCNJ5P48544 419 aa17.47■□□□□ 0.39
STRADB-202ENST00000392249 EMX1Q04741 257 aaPredicted RBP17.47■□□□□ 0.39
STRADB-202ENST00000392249 NPTX1Q15818 432 aa17.47■□□□□ 0.39
STRADB-202ENST00000392249 FCRL6Q6DN72 434 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms