RNA–Protein interactions for RNA: ENST00000391248.1

RNU1-78P-201, Transcript of RNA, U1 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU1-78P, Length 165 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-78P-201ENST00000391248 PDGFCQ9NRA1 345 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 ACOXLQ9NUZ1 547 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 ZNF701Q9NV72 531 aaPredicted RBP1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 FAM120CQ9NX05 1096 aaKnown RBP1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 SLC2A8Q9NY64 477 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 SPHK1Q9NYA1 384 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 EPHA6Q9UF33 1036 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 SLC7A8Q9UHI5 535 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 NARFQ9UHQ1 456 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 BCAP29Q9UHQ4 241 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 PITPNC1Q9UKF7 332 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 PACSIN3Q9UKS6 424 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 ANGPTL2Q9UKU9 493 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 B9D1Q9UPM9 204 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 ERVK-19Q9WJR5 959 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 RNF24Q9Y225 148 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 GSTK1Q9Y2Q3 226 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 CSDC2Q9Y534 153 aaKnown RBP1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 NME7Q9Y5B8 376 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 ETV7Q9Y603 341 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 HS3ST3A1Q9Y663 406 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 RNF215Q9Y6U7 377 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 CEP152O94986 1710 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 WDR90Q96KV7 1748 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 DNMT1P26358 1616 aaKnown RBP1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 NHSL1Q5SYE7 1610 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 ABCA9Q8IUA7 1624 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 RNF17Q9BXT8 1623 aaKnown RBP1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 TOP2AP11388 1531 aaKnown RBP1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 RGS12O14924 1447 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 MUC3AQ02505 3323 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 NCOA1Q15788 1441 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 SNED1Q8TER0 1413 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 LAMA2P24043 3122 aaKnown RBP1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 WDR17Q8IZU2 1322 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 SH3TC1Q8TE82 1336 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 SALL1Q9NSC2 1324 aa1.4□□□□□ -2.19
RNU1-78P-201ENST00000391248 RGPD8O14715 1765 aaPredicted RBP1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 CASZ1Q86V15 1759 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 DIP2AQ14689 1571 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 IQSEC2Q5JU85 1478 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 KANK1Q14678 1352 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 AK9Q5TCS8 1911 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 TRBV5-3A0A0A0MS03 114 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 TRAV25A0A0B4J276 109 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 A0A1W2PPV4 95 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 LOC390937A0A1W2PQ73 354 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 MED19A0JLT2 244 aaPredicted RBP1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 KRTAP23-1A1A580 65 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 MTMR11A4FU01 709 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 FAM74A7A6NL05 159 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 SNTNA6NMZ2 147 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 GABRR3A8MPY1 467 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 TCP11X1B4DZS4 312 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 NPIPB6E9PJ23 425 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 PPIAL4DF5H284 164 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 ZNF701M0R085 212 aaPredicted RBP1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 PSMD11O00231 422 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 TIMM23O14925 209 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 CASKO14936 926 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 MDM4O15151 490 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 MATN3O15232 486 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 NBR2O15453 112 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 RS1O15537 224 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 RRP8O43159 456 aaKnown RBP1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 ZSCAN12O43309 604 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 LAMTOR5O43504 91 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 LDB2O43679 373 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 TLX3O43711 291 aaPredicted RBP1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 CIDEAO60543 219 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 SH3BGRLO75368 114 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 TRIM3O75382 744 aaPredicted RBP1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 SERPINI2O75830 405 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 JTBO76095 146 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 EML2O95834 649 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 NDUFB10O96000 172 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 CST1P01037 141 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 CHRNA1P02708 482 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 FTH1P02794 183 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 VTNP04004 478 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 GLAP06280 429 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 TPM3P06753 285 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 LYNP07948 512 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 FHP07954 510 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 MMP3P08254 477 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 IGFBP1P08833 259 aaPredicted RBP1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 ALOX5P09917 674 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 GP9P14770 177 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 ETS2P15036 469 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 AMD1P17707 334 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 CHRNB2P17787 502 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 CD58P19256 250 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 MSH3P20585 1137 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 COMTP21964 271 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 GPX3P22352 226 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 CPN2P22792 545 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 LHCGRP22888 699 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 ITGB7P26010 798 aa1.39□□□□□ -2.19
RNU1-78P-201ENST00000391248 SSTR2P30874 369 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms