RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 CNPPD1Q9BV87 410 aa14.01□□□□□ -0.17
IGHV3-53-201ENST00000390627 MANSC1Q9H8J5 431 aa14.01□□□□□ -0.17
IGHV3-53-201ENST00000390627 MIEF1Q9NQG6 463 aa14.01□□□□□ -0.17
IGHV3-53-201ENST00000390627 GIMAP4Q9NUV9 329 aa14.01□□□□□ -0.17
IGHV3-53-201ENST00000390627 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.01□□□□□ -0.17
IGHV3-53-201ENST00000390627 STMN3Q9NZ72 180 aa14.01□□□□□ -0.17
IGHV3-53-201ENST00000390627 HEY2Q9UBP5 337 aa14.01□□□□□ -0.17
IGHV3-53-201ENST00000390627 ENTPD4Q9Y227 616 aa14.01□□□□□ -0.17
IGHV3-53-201ENST00000390627 B3GNT3Q9Y2A9 372 aa14.01□□□□□ -0.17
IGHV3-53-201ENST00000390627 TLN1Q9Y490 2541 aaKnown RBP14□□□□□ -0.17
IGHV3-53-201ENST00000390627 FCHO1O14526 889 aa14□□□□□ -0.17
IGHV3-53-201ENST00000390627 KLF11O14901 512 aa14□□□□□ -0.17
IGHV3-53-201ENST00000390627 SNNO75324 88 aaPredicted RBP14□□□□□ -0.17
IGHV3-53-201ENST00000390627 ZFAND5O76080 213 aa14□□□□□ -0.17
IGHV3-53-201ENST00000390627 NT5EP21589 574 aa14□□□□□ -0.17
IGHV3-53-201ENST00000390627 CASRP41180 1078 aa14□□□□□ -0.17
IGHV3-53-201ENST00000390627 CD97P48960 835 aa14□□□□□ -0.17
IGHV3-53-201ENST00000390627 ERVK-8P63133 956 aa14□□□□□ -0.17
IGHV3-53-201ENST00000390627 PPP2R2AP63151 447 aa14□□□□□ -0.17
IGHV3-53-201ENST00000390627 C2orf80Q0P641 193 aa14□□□□□ -0.17
IGHV3-53-201ENST00000390627 TLR1Q15399 786 aa14□□□□□ -0.17
IGHV3-53-201ENST00000390627 RFTN2Q52LD8 501 aaPredicted RBP14□□□□□ -0.17
IGHV3-53-201ENST00000390627 FAM71E1Q6IPT2 247 aa14□□□□□ -0.17
IGHV3-53-201ENST00000390627 HSDL2Q6YN16 418 aa14□□□□□ -0.17
IGHV3-53-201ENST00000390627 Q6ZS92 163 aa14□□□□□ -0.17
IGHV3-53-201ENST00000390627 GALNT12Q8IXK2 581 aa14□□□□□ -0.17
IGHV3-53-201ENST00000390627 BEST3Q8N1M1 668 aa14□□□□□ -0.17
IGHV3-53-201ENST00000390627 LRRC25Q8N386 305 aaPredicted RBP14□□□□□ -0.17
IGHV3-53-201ENST00000390627 OR8K3Q8NH51 312 aa14□□□□□ -0.17
IGHV3-53-201ENST00000390627 ZNF721Q8TF20 911 aa14□□□□□ -0.17
IGHV3-53-201ENST00000390627 TUBGCP3Q96CW5 907 aa14□□□□□ -0.17
IGHV3-53-201ENST00000390627 SENP5Q96HI0 755 aaPredicted RBP14□□□□□ -0.17
IGHV3-53-201ENST00000390627 MFRPQ9BY79 579 aa14□□□□□ -0.17
IGHV3-53-201ENST00000390627 CDCP1Q9H5V8 836 aa14□□□□□ -0.17
IGHV3-53-201ENST00000390627 ZNF223Q9UK11 482 aaPredicted RBP14□□□□□ -0.17
IGHV3-53-201ENST00000390627 ERVK-19Q9WJR5 959 aa14□□□□□ -0.17
IGHV3-53-201ENST00000390627 CPAMD8Q8IZJ3 1885 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 ATP6AP2A0A1C7CYW4 349 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 A0A1W2PS29 197 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 OR5H15A6NDH6 313 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 GABRR3A8MPY1 467 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 SUV39H1O43463 412 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 PEX11AO75192 247 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 ATP6AP2O75787 350 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 WDPCPO95876 746 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 IGKV3-11P04433 115 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 ATP1B1P05026 303 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 SDC1P18827 310 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 FEN1P39748 380 aaKnown RBP13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 ASMTP46597 345 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 MLF1P58340 268 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 MAD2L1Q13257 205 aaPredicted RBP13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 ZNF267Q14586 743 aaPredicted RBP13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 DGAT2L6Q6ZPD8 337 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 PRICKLE2Q7Z3G6 844 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 ARMC10Q8N2F6 343 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 FNDC5Q8NAU1 212 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 OR5L2Q8NGL0 311 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 DYDC1Q8WWB3 177 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 EXOSC8Q96B26 276 aaKnown RBP13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 CNRIP1Q96F85 164 aaPredicted RBP13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 C3orf30Q96M34 536 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 NPAS2Q99743 824 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 CXorf21Q9HAI6 301 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 SLAMF7Q9NQ25 335 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 SLC35C2Q9NQQ7 365 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 ZNF446Q9NWS9 450 aa13.99□□□□□ -0.17
IGHV3-53-201ENST00000390627 TRAV17A0A0B4J275 112 aa13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 OR6C76A6NM76 312 aa13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 SLCO1B7G3V0H7 640 aa13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 DDX5P17844 614 aaKnown RBP13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 TACR1P25103 407 aa13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 HK2P52789 917 aa13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 RNF4P78317 190 aa13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 OCRLQ01968 901 aa13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 ZNF169Q14929 603 aaPredicted RBP13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 SMU1Q2TAY7 513 aa13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 ZNF750Q32MQ0 723 aa13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 C6orf136Q5SQH8 315 aa13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 RNF111Q6ZNA4 994 aa13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 SLC29A4Q7RTT9 530 aa13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 TICAM1Q8IUC6 712 aa13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 ZNF321PQ8N8H1 164 aa13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 SUN3Q8TAQ9 357 aa13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 LRRC8CQ8TDW0 803 aa13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 THAP3Q8WTV1 239 aaPredicted RBP13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 ZNF75CPQ92670 426 aaPredicted RBP13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 ZNF681Q96N22 645 aa13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 TSSK3Q96PN8 268 aa13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 UTP23Q9BRU9 249 aaKnown RBP13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 BRINP2Q9C0B6 783 aa13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 INTS9Q9NV88 658 aaKnown RBP13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 PNPOQ9NVS9 261 aa13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 PLA2G3Q9NZ20 509 aa13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 GIMAP2Q9UG22 337 aa13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 CSAG2Q9Y5P2 127 aa13.98□□□□□ -0.17
IGHV3-53-201ENST00000390627 SLC28A2O43868 658 aa13.97□□□□□ -0.17
IGHV3-53-201ENST00000390627 MAN1A2O60476 641 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms