RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 PTX3P26022 381 aaPredicted RBP15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 SSTR4P31391 388 aa15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 DSTNP60981 165 aa15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 RBBP4Q09028 425 aa15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 GPM6BQ13491 265 aa15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 PDE7AQ13946 482 aa15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 SPHARQ15513 63 aa15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 ZNF630Q2M218 657 aaPredicted RBP15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 TIMM50Q3ZCQ8 353 aa15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 ARMC4Q5T2S8 1044 aa15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 ZNF517Q6ZMY9 492 aaPredicted RBP15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 SZRD1Q7Z422 152 aa15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 TCEANCQ8N8B7 351 aa15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 SLC38A5Q8WUX1 472 aa15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 OTUB1Q96FW1 271 aaPredicted RBP15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 SLC25A19Q9HC21 320 aa15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 FBXO46Q6PJ61 603 aaPredicted RBP15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 VASH1Q7L8A9 365 aaPredicted RBP15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 COMTD1Q86VU5 262 aa15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 CXorf40AQ8TE69 158 aa15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 ANGPT4Q9Y264 503 aa15.43■□□□□ 0.06
NKX3-1-201ENST00000380871 IGLON5A6NGN9 336 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 PSMB5P28074 263 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 PTGER1P34995 402 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 IL12RB1P42701 662 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 DCDC1P59894 354 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 TEKQ02763 1124 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 ZNF91Q05481 1191 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 CNTN1Q12860 1018 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 ZNF547Q8IVP9 402 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 ZNF557Q8N988 423 aaPredicted RBP15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 ST6GAL2Q96JF0 529 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 CCDC32Q9BV29 185 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 NDEL1Q9GZM8 345 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 MOV10Q9HCE1 1003 aaKnown RBP15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 MIEF1Q9NQG6 463 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 SPATA7Q9P0W8 599 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 SLC23A2Q9UGH3 650 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 OR1A2Q9Y585 309 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 KIAA1671Q9BY89 1806 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 SH3D21A4FU49 640 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 CAPN5O15484 640 aaPredicted RBP15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 SOD1P00441 154 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 IL7P13232 177 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 TNNI3P19429 210 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 DMPKQ09013 629 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 HNRNPA1L2Q32P51 320 aaKnown RBP15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 TMPRSS11AQ6ZMR5 421 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 APOBEC4Q8WW27 367 aaKnown RBP15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 LGR4Q9BXB1 951 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 POLR2J2Q9GZM3 115 aaKnown RBP15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 RMI1Q9H9A7 625 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 CARD8Q9Y2G2 431 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 DSPPQ9NZW4 1301 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 HOXC11O43248 304 aaPredicted RBP15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 B4GALT2O60909 372 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 CD72P21854 359 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 SEC13P55735 322 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 FLYWCH1Q4VC44 716 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 TCTN3Q6NUS6 607 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 ZNF544Q6NX49 715 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 VN1R5Q7Z5H4 357 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 C11orf74Q86VG3 221 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 OTUB2Q96DC9 234 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 TMEM19Q96HH6 336 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 METTL2AQ96IZ6 378 aaKnown RBP15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 UCK2Q9BZX2 261 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 CTPS2Q9NRF8 586 aa15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 CRNNQ9UBG3 495 aaPredicted RBP15.42■□□□□ 0.06
NKX3-1-201ENST00000380871 FEZF1A0PJY2 475 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 ANKDD1BA6NHY2 528 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 ELAVL4P26378 380 aaKnown RBP15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 MRPS15P82914 257 aaKnown RBP15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 TANGO2Q6ICL3 276 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 OR9A1PQ8NGU1 263 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 UCN3Q969E3 161 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 CXorf40BQ96DE9 158 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 MVB12BQ9H7P6 319 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 TAC3Q9UHF0 121 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 DENND4CQ5VZ89 1909 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 A0A075B6Q4 140 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 GUCY1B2O75343 617 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 CDRT1O95170 752 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 PAK4O96013 591 aaPredicted RBP15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 CSF2P04141 144 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 C1GALT1C1LP0DN25 315 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 CSTF2P33240 577 aaKnown RBP eCLIP15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 TAP2Q03519 686 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 HSPB3Q12988 150 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 KRR1Q13601 381 aaKnown RBP15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 TBRG1Q3YBR2 411 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 SYT14Q8NB59 555 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 COQ10AQ96MF6 247 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 TSSK6Q9BXA6 273 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 ABCB9Q9NP78 766 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 KCND3Q9UK17 655 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 AP1M2Q9Y6Q5 423 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 QSOX1O00391 747 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 RGS13O14921 159 aa15.41■□□□□ 0.06
NKX3-1-201ENST00000380871 SRPRAP08240 638 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms