RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 TBC1D29Q9UFV1 150 aa11.95□□□□□ -0.5
VPS16-202ENST00000380445 PCOLCE2Q9UKZ9 415 aa11.95□□□□□ -0.5
VPS16-202ENST00000380445 ENTPD4Q9Y227 616 aa11.95□□□□□ -0.5
VPS16-202ENST00000380445 PCDHGA10Q9Y5H3 936 aa11.95□□□□□ -0.5
VPS16-202ENST00000380445 PLXND1Q9Y4D7 1925 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 TMX2-CTNND1H3BSU7 103 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 TNFRSF10CO14798 259 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 CHRM5P08912 532 aaPredicted RBP11.94□□□□□ -0.5
VPS16-202ENST00000380445 HNRNPA2B1P22626 353 aaKnown RBP11.94□□□□□ -0.5
VPS16-202ENST00000380445 ATP5A1P25705 553 aaKnown RBP11.94□□□□□ -0.5
VPS16-202ENST00000380445 MAPK10P53779 464 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 HYAL2Q12891 473 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 CYP27C1Q4G0S4 372 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 TOR1AIP1Q5JTV8 583 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 MLIPQ5VWP3 458 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 ZNF425Q6IV72 752 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 SFXN5Q8TD22 340 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 FKBP10Q96AY3 582 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 MRGPRX1Q96LB2 322 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 ZNF354BQ96LW1 612 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 ALPK1Q96QP1 1244 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 MAPKAP1Q9BPZ7 522 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 SPATA5L1Q9BVQ7 753 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 PLCXD1Q9NUJ7 323 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 GIMAP4Q9NUV9 329 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 CLDND1Q9NY35 253 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 SPHK1Q9NYA1 384 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 SEC14L3Q9UDX4 400 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 ENPP5Q9UJA9 477 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 KCND3Q9UK17 655 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 TMCC3Q9ULS5 477 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 ASB4Q9Y574 426 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 PIAS3Q9Y6X2 628 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 C5orf42Q9H799 3197 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 LRRC72A6NJI9 287 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 J3KTA2 159 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 PPM1DO15297 605 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 SLC28A2O43868 658 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 CNOT3O75175 753 aaKnown RBP11.94□□□□□ -0.5
VPS16-202ENST00000380445 INMTO95050 263 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 CD247P20963 164 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 PEBP1P30086 187 aaKnown RBP11.94□□□□□ -0.5
VPS16-202ENST00000380445 KRT20P35900 424 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 KHKP50053 298 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 SMIM11AP58511 58 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 RPS15AP62244 130 aaKnown RBP11.94□□□□□ -0.5
VPS16-202ENST00000380445 SZRD1Q7Z422 152 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 CCDC71Q8IV32 467 aaPredicted RBP11.94□□□□□ -0.5
VPS16-202ENST00000380445 FAM20CQ8IXL6 584 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 OR4E2Q8NGC2 313 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 OR8K5Q8NH50 307 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 TBC1D15Q8TC07 691 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 OR1E3Q8WZA6 343 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 RAB8BQ92930 207 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 BORCS5Q969J3 196 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 NIPSNAP1Q9BPW8 284 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 AICDAQ9GZX7 198 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 RNF6Q9Y252 685 aa11.94□□□□□ -0.5
VPS16-202ENST00000380445 ATG2BQ96BY7 2078 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 ZW10O43264 779 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 WBP4O75554 376 aaKnown RBP11.93□□□□□ -0.5
VPS16-202ENST00000380445 ERAL1O75616 437 aaKnown RBP11.93□□□□□ -0.5
VPS16-202ENST00000380445 KCNJ5P48544 419 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 ST13P50502 369 aaKnown RBP11.93□□□□□ -0.5
VPS16-202ENST00000380445 CRISP3P54108 245 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 GP2P55259 537 aaKnown RBP11.93□□□□□ -0.5
VPS16-202ENST00000380445 C21orf59P57076 290 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 CLDN2P57739 230 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 GANABQ14697 944 aaKnown RBP11.93□□□□□ -0.5
VPS16-202ENST00000380445 ZNF829Q3KNS6 432 aaPredicted RBP11.93□□□□□ -0.5
VPS16-202ENST00000380445 RPS26P11Q5JNZ5 115 aaPredicted RBP11.93□□□□□ -0.5
VPS16-202ENST00000380445 TJAP1Q5JTD0 557 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 EOGTQ5NDL2 527 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 SYT6Q5T7P8 510 aaPredicted RBP11.93□□□□□ -0.5
VPS16-202ENST00000380445 NIPAL1Q6NVV3 410 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 KIAA1324Q6UXG2 1013 aaKnown RBP11.93□□□□□ -0.5
VPS16-202ENST00000380445 XAGE5Q8WWM1 108 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 FCGR1BQ92637 280 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 MYDGFQ969H8 173 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 OR51I1Q9H343 314 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 SRMSQ9H3Y6 488 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 LYARQ9NX58 379 aaKnown RBP11.93□□□□□ -0.5
VPS16-202ENST00000380445 TRPC4Q9UBN4 977 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 NOX1Q9Y5S8 564 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 PCDH17O14917 1159 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 SCAMP1O15126 338 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 B4GALT2O60909 372 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 OR12D1P0DN82 309 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 NR2F1P10589 423 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 MPIP34949 423 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 YPEL5P62699 121 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 RGS1Q08116 209 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 BNIP3Q12983 259 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 PUM1Q14671 1186 aaKnown RBP eCLIP11.93□□□□□ -0.5
VPS16-202ENST00000380445 SMN1Q16637 294 aaKnown RBP11.93□□□□□ -0.5
VPS16-202ENST00000380445 MOGQ16653 247 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 RD3Q7Z3Z2 195 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 TMCO5AQ8N6Q1 288 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 RHOXF1Q8NHV9 184 aa11.93□□□□□ -0.5
VPS16-202ENST00000380445 APOBEC4Q8WW27 367 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms