RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 EIF2S3P41091 472 aaKnown RBP14.36□□□□□ -0.11
NPHP4-201ENST00000378156 SLC9A3P48764 834 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 CEBPGP53567 150 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 ST3GAL4Q11206 333 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 ARMC10Q8N2F6 343 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 SPERTQ8NA61 448 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 TSACCQ96A04 125 aaPredicted RBP14.36□□□□□ -0.11
NPHP4-201ENST00000378156 RHBDF1Q96CC6 855 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 INPP5KQ9BT40 448 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 DOHHQ9BU89 302 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 FUNDC2Q9BWH2 189 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 GPRC5BQ9NZH0 403 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 SLAMF8Q9P0V8 285 aa14.36□□□□□ -0.11
NPHP4-201ENST00000378156 C5orf51A6NDU8 294 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 KCNJ13O60928 360 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 ITGBL1O95965 494 aaPredicted RBP14.35□□□□□ -0.11
NPHP4-201ENST00000378156 ZNF181Q2M3W8 571 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 PYHIN1Q6K0P9 492 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 RTL10Q7L3V2 364 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 PM20D2Q8IYS1 436 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 NR4A3Q92570 626 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 PRTFDC1Q9NRG1 225 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 AGPAT4Q9NRZ5 378 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 MAGED1Q9Y5V3 778 aaPredicted RBP14.35□□□□□ -0.11
NPHP4-201ENST00000378156 STRCP1A6NGW2 1772 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 C1orf226A1L170 272 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 MAGEA12P43365 314 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 ZXDBP98169 803 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 CD47Q08722 323 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 TRAM2Q15035 370 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 GALNTL5Q7Z4T8 443 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 TMEM17Q86X19 198 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 TCEANCQ8N8B7 351 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 TRUB1Q8WWH5 349 aaKnown RBP14.35□□□□□ -0.11
NPHP4-201ENST00000378156 FGF13Q92913 245 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 RBCK1Q9BYM8 510 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 SDHAF3Q9NRP4 125 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 EMC3Q9P0I2 261 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 ACSL6Q9UKU0 697 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 HCFC2Q9Y5Z7 792 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 MUSKO15146 869 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 B4GAT1O43505 415 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 LILRB3O75022 631 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 OR12D1P0DN82 309 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 TMEM35AQ53FP2 167 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 FUZQ9BT04 418 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 CPEB1Q9BZB8 566 aaKnown RBP14.35□□□□□ -0.11
NPHP4-201ENST00000378156 OR2B2Q9GZK3 357 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 CD93Q9NPY3 652 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 FAM221BA6H8Z2 402 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 NPRL3Q12980 569 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 RPA4Q13156 261 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 THAP6Q8TBB0 222 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 PTCHD1Q96NR3 888 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 MGAT4BQ9UQ53 548 aa14.35□□□□□ -0.11
NPHP4-201ENST00000378156 A0A1B0GVG6 124 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 A0A1W2PRQ8 180 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 SMIM30A4D0T7 59 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 C7orf72A4D263 438 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 HHLA1C9JL84 531 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 LAMP1P11279 417 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 OR3A3P47888 321 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 OR3A2P47893 321 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 POU6F2P78424 691 aaPredicted RBP14.34□□□□□ -0.11
NPHP4-201ENST00000378156 NFATC3Q12968 1075 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 ANKDD1AQ495B1 522 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 C12orf40Q86WS4 652 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 BBS10Q8TAM1 723 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 PDE7BQ9NP56 450 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 CMAHPQ9Y471 501 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 FEZF1A0PJY2 475 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 SEMA4FO95754 770 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 FAM189A2Q15884 450 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.34□□□□□ -0.11
NPHP4-201ENST00000378156 HSD17B12Q53GQ0 312 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 CDKL4Q5MAI5 379 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 HSDL2Q6YN16 418 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 ZNF852Q6ZMS4 543 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 PGBD5Q8N414 524 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 LSM14AQ8ND56 463 aaKnown RBP14.34□□□□□ -0.11
NPHP4-201ENST00000378156 OR2L5Q8NG80 312 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 OR2L3Q8NG85 312 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.34□□□□□ -0.11
NPHP4-201ENST00000378156 SHKBP1Q8TBC3 707 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 MAL2Q969L2 176 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 TRPV4Q9HBA0 871 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 LIPT1Q9Y234 373 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 ZNF726A6NNF4 738 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 PUM1Q14671 1186 aaKnown RBP eCLIP14.34□□□□□ -0.11
NPHP4-201ENST00000378156 PTPRRQ15256 657 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 EXOC3L2Q2M3D2 409 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 UAP1L1Q3KQV9 507 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 SHQ1Q6PI26 577 aaKnown RBP14.34□□□□□ -0.11
NPHP4-201ENST00000378156 CARM1Q86X55 608 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 OR2AJ1Q8NGZ0 328 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 FOXJ1Q92949 421 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 KCNN1Q92952 543 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 NUDT15Q9NV35 164 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 KLRF1Q9NZS2 232 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 C19orf25Q9UFG5 118 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms