RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 MYOCOSA0A1B0GUC4 107 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 DPM1O60762 260 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 DDAH2O95865 285 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 TACR1P25103 407 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 RPL3P39023 403 aaKnown RBP12.34□□□□□ -0.43
CKAP2-202ENST00000378034 ERVK-8P63133 956 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 CEBPEQ15744 281 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 C6orf163Q5TEZ5 329 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 WDR75Q8IWA0 830 aaKnown RBP12.34□□□□□ -0.43
CKAP2-202ENST00000378034 FAM9CQ8IZT9 166 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 ARMC10Q8N2F6 343 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 LRRC25Q8N386 305 aaPredicted RBP12.34□□□□□ -0.43
CKAP2-202ENST00000378034 OR8K3Q8NH51 312 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 CDC26Q8NHZ8 85 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 SLC2A12Q8TD20 617 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 PPWD1Q96BP3 646 aaKnown RBP12.34□□□□□ -0.43
CKAP2-202ENST00000378034 CNRIP1Q96F85 164 aaPredicted RBP12.34□□□□□ -0.43
CKAP2-202ENST00000378034 SENP5Q96HI0 755 aaPredicted RBP12.34□□□□□ -0.43
CKAP2-202ENST00000378034 ZNF681Q96N22 645 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 DEFB126Q9BYW3 111 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 EPS8L2Q9H6S3 715 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 CXorf21Q9HAI6 301 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 SLC35C2Q9NQQ7 365 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 PTGFRNQ9P2B2 879 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 MAPRE3Q9UPY8 281 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 ENTPD4Q9Y227 616 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 ATMQ13315 3056 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 ZFAND5O76080 213 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 MEP1AQ16819 746 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 SOWAHCQ53LP3 525 aaPredicted RBP12.34□□□□□ -0.43
CKAP2-202ENST00000378034 ABHD17BQ5VST6 288 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 IL23RQ5VWK5 629 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 LARP4Q71RC2 724 aaKnown RBP eCLIP12.34□□□□□ -0.434e-6■■□□□ 12.8
CKAP2-202ENST00000378034 R3HCC1LQ7Z5L2 792 aaKnown RBP12.34□□□□□ -0.43
CKAP2-202ENST00000378034 TICAM1Q8IUC6 712 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 GALNT12Q8IXK2 581 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 LIX1Q8N485 282 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 SIRT6Q8N6T7 355 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 ZNF721Q8TF20 911 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 EGLN2Q96KS0 407 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 BBC3Q96PG8 261 aaPredicted RBP12.34□□□□□ -0.43
CKAP2-202ENST00000378034 OR8D2Q9GZM6 311 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 RNF32Q9H0A6 362 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 REEP4Q9H6H4 257 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 ZNF71Q9NQZ8 489 aaPredicted RBP12.34□□□□□ -0.43
CKAP2-202ENST00000378034 RYDENQ9NUL5 291 aaKnown RBP12.34□□□□□ -0.43
CKAP2-202ENST00000378034 MARCOQ9UEW3 520 aaPredicted RBP12.34□□□□□ -0.43
CKAP2-202ENST00000378034 GIMAP2Q9UG22 337 aa12.34□□□□□ -0.43
CKAP2-202ENST00000378034 EXO1Q9UQ84 846 aaKnown RBP12.34□□□□□ -0.43
CKAP2-202ENST00000378034 CPAMD8Q8IZJ3 1885 aa12.33□□□□□ -0.44
CKAP2-202ENST00000378034 TRBV11-1A0A0K0K1C0 115 aa12.33□□□□□ -0.44
CKAP2-202ENST00000378034 A8MUI8 341 aa12.33□□□□□ -0.44
CKAP2-202ENST00000378034 SDHDO14521 159 aa12.33□□□□□ -0.44
CKAP2-202ENST00000378034 TGDSO95455 350 aa12.33□□□□□ -0.44
CKAP2-202ENST00000378034 PDGFAP04085 211 aa12.33□□□□□ -0.44
CKAP2-202ENST00000378034 IGKV3-11P04433 115 aa12.33□□□□□ -0.44
CKAP2-202ENST00000378034 KITP10721 976 aa12.33□□□□□ -0.44
CKAP2-202ENST00000378034 LBPP18428 481 aa12.33□□□□□ -0.44
CKAP2-202ENST00000378034 MPIP34949 423 aa12.33□□□□□ -0.44
CKAP2-202ENST00000378034 FEN1P39748 380 aaKnown RBP12.33□□□□□ -0.44
CKAP2-202ENST00000378034 MAP4K2Q12851 820 aa12.33□□□□□ -0.44
CKAP2-202ENST00000378034 OGFOD2Q6N063 350 aa12.33□□□□□ -0.44
CKAP2-202ENST00000378034 HSDL2Q6YN16 418 aa12.33□□□□□ -0.44
CKAP2-202ENST00000378034 ZADH2Q8N4Q0 377 aa12.33□□□□□ -0.44
CKAP2-202ENST00000378034 EXOSC8Q96B26 276 aaKnown RBP12.33□□□□□ -0.44
CKAP2-202ENST00000378034 PPP1R36Q96LQ0 422 aa12.33□□□□□ -0.44
CKAP2-202ENST00000378034 TSSK3Q96PN8 268 aa12.33□□□□□ -0.44
CKAP2-202ENST00000378034 C1orf50Q9BV19 199 aa12.33□□□□□ -0.44
CKAP2-202ENST00000378034 ABI3Q9P2A4 366 aa12.33□□□□□ -0.44
CKAP2-202ENST00000378034 FAM208BQ5VWN6 2430 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 OR6C76A6NM76 312 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 MYO1GB0I1T2 1018 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 K7EM74 188 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 SLITRK5O94991 958 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 NT5EP21589 574 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 HPCAL1P37235 193 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 C21orf58P58505 322 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 FUT7Q11130 342 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 PDE7AQ13946 482 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 ZNF267Q14586 743 aaPredicted RBP12.32□□□□□ -0.44
CKAP2-202ENST00000378034 ACER2Q5QJU3 275 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 DGAT2L6Q6ZPD8 337 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 SPATA19Q7Z5L4 167 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 RPS19BP1Q86WX3 136 aaKnown RBP12.32□□□□□ -0.44
CKAP2-202ENST00000378034 KIF2BQ8N4N8 673 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 OR7G1Q8NGA0 311 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 OR5L2Q8NGL0 311 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 ZNF675Q8TD23 568 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 ERP27Q96DN0 273 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 MAELQ96JY0 434 aaKnown RBP12.32□□□□□ -0.44
CKAP2-202ENST00000378034 BBS4Q96RK4 519 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 SLCO1B3Q9NPD5 702 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 STMN3Q9NZ72 180 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 BAIAP2L1Q9UHR4 511 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 ZNF223Q9UK11 482 aaPredicted RBP12.32□□□□□ -0.44
CKAP2-202ENST00000378034 CROCCQ5TZA2 2017 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 PIEZO2Q9H5I5 2752 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 A0A1W2PS29 197 aa12.32□□□□□ -0.44
CKAP2-202ENST00000378034 EIF4E1BA6NMX2 242 aaKnown RBP12.32□□□□□ -0.44
CKAP2-202ENST00000378034 PRPS1L1P21108 318 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms