RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 TRIM69Q86WT6 500 aa23.98■■□□□ 1.43
C9orf40-201ENST00000376854 TMIEQ8NEW7 156 aa23.98■■□□□ 1.43
C9orf40-201ENST00000376854 SLC7A13Q8TCU3 470 aa23.98■■□□□ 1.43
C9orf40-201ENST00000376854 OR8D1Q8WZ84 308 aa23.98■■□□□ 1.43
C9orf40-201ENST00000376854 ZBED6CLQ96FA7 236 aaPredicted RBP23.98■■□□□ 1.43
C9orf40-201ENST00000376854 TSSK6Q9BXA6 273 aa23.98■■□□□ 1.43
C9orf40-201ENST00000376854 IL23AQ9NPF7 189 aa23.98■■□□□ 1.43
C9orf40-201ENST00000376854 FBXL12Q9NXK8 326 aa23.98■■□□□ 1.43
C9orf40-201ENST00000376854 KLHL3Q9UH77 587 aa23.98■■□□□ 1.43
C9orf40-201ENST00000376854 RBMX2Q9Y388 322 aaKnown RBP23.98■■□□□ 1.43
C9orf40-201ENST00000376854 PRRT4C9JH25 899 aa23.97■■□□□ 1.43
C9orf40-201ENST00000376854 DYRK3O43781 588 aa23.97■■□□□ 1.43
C9orf40-201ENST00000376854 GSTT2P0CG29 244 aa23.97■■□□□ 1.43
C9orf40-201ENST00000376854 GSTT2BP0CG30 244 aa23.97■■□□□ 1.43
C9orf40-201ENST00000376854 DDX5P17844 614 aaKnown RBP23.97■■□□□ 1.43
C9orf40-201ENST00000376854 ENDOUP21128 410 aaKnown RBP23.97■■□□□ 1.43
C9orf40-201ENST00000376854 CXCR2P25025 360 aa23.97■■□□□ 1.43
C9orf40-201ENST00000376854 PSMA1P25786 263 aaKnown RBP23.97■■□□□ 1.43
C9orf40-201ENST00000376854 FRKP42685 505 aaPredicted RBP23.97■■□□□ 1.43
C9orf40-201ENST00000376854 CCT3P49368 545 aaKnown RBP23.97■■□□□ 1.43
C9orf40-201ENST00000376854 SPATC1Q76KD6 591 aa23.97■■□□□ 1.43
C9orf40-201ENST00000376854 CELF5Q8N6W0 485 aaKnown RBP23.97■■□□□ 1.43
C9orf40-201ENST00000376854 CELF2-AS1Q8N7Q2 184 aa23.97■■□□□ 1.43
C9orf40-201ENST00000376854 RASSF5Q8WWW0 418 aa23.97■■□□□ 1.43
C9orf40-201ENST00000376854 SLC6A18Q96N87 628 aa23.97■■□□□ 1.43
C9orf40-201ENST00000376854 QRFPRQ96P65 431 aa23.97■■□□□ 1.43
C9orf40-201ENST00000376854 LHX9Q9NQ69 397 aa23.97■■□□□ 1.43
C9orf40-201ENST00000376854 SEC14L4Q9UDX3 406 aa23.97■■□□□ 1.43
C9orf40-201ENST00000376854 INSL6Q9Y581 213 aa23.97■■□□□ 1.43
C9orf40-201ENST00000376854 RGS5O15539 181 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 SMIM11AP58511 58 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 MFSD4BQ5TF39 518 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 GDPGP1Q6ZNW5 385 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 AMZ2Q86W34 360 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 RSPRY1Q96DX4 576 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 TREX2Q9BQ50 279 aaPredicted RBP23.96■■□□□ 1.43
C9orf40-201ENST00000376854 BARHL1Q9BZE3 327 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 RACGAP1Q9H0H5 632 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 SERHL2Q9H4I8 314 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 MVB12BQ9H7P6 319 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 ACAD8Q9UKU7 415 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 H7BY64 318 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 SSX4O60224 188 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 TMPRSS11DO60235 418 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 UGT2B17O75795 530 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 SLITRK5O94991 958 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 ERGP11308 486 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 TNNI3P19429 210 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 PSMB5P28074 263 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 CRYBB2P43320 205 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 CCR8P51685 355 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 PIN1Q13526 163 aaPredicted RBP23.96■■□□□ 1.43
C9orf40-201ENST00000376854 BCL2A1Q16548 175 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 SYPL1Q16563 259 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 SZRD1Q7Z422 152 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 OR8H2Q8N162 312 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 PLA2G15Q8NCC3 412 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 SPPL3Q8TCT6 385 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 PRAP1Q96NZ9 151 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 FUZQ9BT04 418 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 WASH6PQ9NQA3 447 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 TEX10Q9NXF1 929 aaPredicted RBP23.96■■□□□ 1.43
C9orf40-201ENST00000376854 SLC23A2Q9UGH3 650 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 KIAA1549LQ6ZVL6 1849 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 LRRK1Q38SD2 2015 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 CCDC88CQ9P219 2028 aa23.96■■□□□ 1.43
C9orf40-201ENST00000376854 OR12D1P0DN82 309 aa23.95■■□□□ 1.43
C9orf40-201ENST00000376854 NUDT13Q86X67 352 aa23.95■■□□□ 1.43
C9orf40-201ENST00000376854 IQCF1Q8N6M8 205 aa23.95■■□□□ 1.43
C9orf40-201ENST00000376854 NANOGP1Q8N7R0 232 aa23.95■■□□□ 1.43
C9orf40-201ENST00000376854 IL17RDQ8NFM7 739 aa23.95■■□□□ 1.43
C9orf40-201ENST00000376854 POLR2J2Q9GZM3 115 aaKnown RBP23.95■■□□□ 1.43
C9orf40-201ENST00000376854 TVP23BQ9NYZ1 205 aa23.95■■□□□ 1.43
C9orf40-201ENST00000376854 STUB1Q9UNE7 303 aa23.95■■□□□ 1.43
C9orf40-201ENST00000376854 TRAPPC4Q9Y296 219 aa23.95■■□□□ 1.43
C9orf40-201ENST00000376854 PLXND1Q9Y4D7 1925 aa23.95■■□□□ 1.42
C9orf40-201ENST00000376854 HEPACAM2A8MVW5 462 aa23.95■■□□□ 1.42
C9orf40-201ENST00000376854 CACNB4O00305 520 aaPredicted RBP23.95■■□□□ 1.42
C9orf40-201ENST00000376854 EIF2S1P05198 315 aaKnown RBP23.95■■□□□ 1.42
C9orf40-201ENST00000376854 HBQ1P09105 142 aa23.95■■□□□ 1.42
C9orf40-201ENST00000376854 RPA4Q13156 261 aa23.95■■□□□ 1.42
C9orf40-201ENST00000376854 HNRNPA1L2Q32P51 320 aaKnown RBP23.95■■□□□ 1.42
C9orf40-201ENST00000376854 TMC5Q6UXY8 1006 aa23.95■■□□□ 1.42
C9orf40-201ENST00000376854 OR5K2Q8NHB8 316 aa23.95■■□□□ 1.42
C9orf40-201ENST00000376854 CHAC2Q8WUX2 184 aa23.95■■□□□ 1.42
C9orf40-201ENST00000376854 TRMT61AQ96FX7 289 aaKnown RBP23.95■■□□□ 1.42
C9orf40-201ENST00000376854 CTRCQ99895 268 aa23.95■■□□□ 1.42
C9orf40-201ENST00000376854 HOXD1Q9GZZ0 328 aa23.95■■□□□ 1.42
C9orf40-201ENST00000376854 SNTG1Q9NSN8 517 aa23.95■■□□□ 1.42
C9orf40-201ENST00000376854 P2RX2Q9UBL9 471 aa23.95■■□□□ 1.42
C9orf40-201ENST00000376854 A4GNTQ9UNA3 340 aa23.95■■□□□ 1.42
C9orf40-201ENST00000376854 SLC27A6Q9Y2P4 619 aa23.95■■□□□ 1.42
C9orf40-201ENST00000376854 WWP2O00308 870 aa23.94■■□□□ 1.42
C9orf40-201ENST00000376854 NME6O75414 186 aaPredicted RBP23.94■■□□□ 1.42
C9orf40-201ENST00000376854 BMPR1AP36894 532 aa23.94■■□□□ 1.42
C9orf40-201ENST00000376854 GSTM5P46439 218 aa23.94■■□□□ 1.42
C9orf40-201ENST00000376854 RORCP51449 518 aa23.94■■□□□ 1.42
C9orf40-201ENST00000376854 REEP5Q00765 189 aa23.94■■□□□ 1.42
C9orf40-201ENST00000376854 ARHGAP19Q14CB8 494 aa23.94■■□□□ 1.42
C9orf40-201ENST00000376854 OCLNQ16625 522 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms