RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 ACBD4Q8NC06 268 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 SPACA9Q96E40 222 aaPredicted RBP19.42■□□□□ 0.7
VSX1-201ENST00000376707 GAL3ST4Q96RP7 486 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 ERVK-6Q9BXR3 956 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 ZNF717Q9BY31 904 aaPredicted RBP19.42■□□□□ 0.7
VSX1-201ENST00000376707 LDAHQ9H6V9 325 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 DDX31Q9H8H2 851 aaKnown RBP19.42■□□□□ 0.7
VSX1-201ENST00000376707 KCNJ16Q9NPI9 418 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 PSD3Q9NYI0 1048 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 TMCO1Q9UM00 188 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 ERVK-19Q9WJR5 959 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 RNF11Q9Y3C5 154 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 ASB4Q9Y574 426 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 IKBKGQ9Y6K9 419 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.42■□□□□ 0.7
VSX1-201ENST00000376707 A0A0A6YYD5 115 aa19.41■□□□□ 0.7
VSX1-201ENST00000376707 A0A1W2PR48 441 aa19.41■□□□□ 0.7
VSX1-201ENST00000376707 NKX2-6A6NCS4 301 aa19.41■□□□□ 0.7
VSX1-201ENST00000376707 TMPRSS11DO60235 418 aa19.41■□□□□ 0.7
VSX1-201ENST00000376707 KRT38O76015 456 aa19.41■□□□□ 0.7
VSX1-201ENST00000376707 CLDN9O95484 217 aa19.41■□□□□ 0.7
VSX1-201ENST00000376707 NADKO95544 446 aaPredicted RBP19.41■□□□□ 0.7
VSX1-201ENST00000376707 RBP1P09455 135 aa19.41■□□□□ 0.7
VSX1-201ENST00000376707 COL6A2P12110 1019 aa19.41■□□□□ 0.7
VSX1-201ENST00000376707 CNTFP26441 200 aa19.41■□□□□ 0.7
VSX1-201ENST00000376707 ACVR2AP27037 513 aa19.41■□□□□ 0.7
VSX1-201ENST00000376707 MAN2A2P49641 1150 aa19.41■□□□□ 0.7
VSX1-201ENST00000376707 NEK2P51955 445 aa19.41■□□□□ 0.7
VSX1-201ENST00000376707 KCNJ2P63252 427 aa19.41■□□□□ 0.7
VSX1-201ENST00000376707 TBL3Q12788 808 aaKnown RBP19.41■□□□□ 0.7
VSX1-201ENST00000376707 SLC10A1Q14973 349 aa19.41■□□□□ 0.7
VSX1-201ENST00000376707 SPRED3Q2MJR0 410 aa19.41■□□□□ 0.7
VSX1-201ENST00000376707 RIT1Q92963 219 aa19.41■□□□□ 0.7
VSX1-201ENST00000376707 ATP6V1E2Q96A05 226 aa19.41■□□□□ 0.7
VSX1-201ENST00000376707 TREX2Q9BQ50 279 aaPredicted RBP19.41■□□□□ 0.7
VSX1-201ENST00000376707 UCK2Q9BZX2 261 aa19.41■□□□□ 0.7
VSX1-201ENST00000376707 EXO5Q9H790 373 aa19.41■□□□□ 0.7
VSX1-201ENST00000376707 SEMA4BQ9NPR2 832 aaPredicted RBP19.41■□□□□ 0.7
VSX1-201ENST00000376707 ZNF358Q9NW07 568 aa19.41■□□□□ 0.7
VSX1-201ENST00000376707 ITGB1BP2Q9UKP3 347 aa19.41■□□□□ 0.7
VSX1-201ENST00000376707 OTOGQ6ZRI0 2925 aa19.41■□□□□ 0.7
VSX1-201ENST00000376707 A0A1B0GVC2 190 aa19.4■□□□□ 0.7
VSX1-201ENST00000376707 WASHC1A8K0Z3 465 aa19.4■□□□□ 0.7
VSX1-201ENST00000376707 STX16-NPEPL1H3BU86 382 aa19.4■□□□□ 0.7
VSX1-201ENST00000376707 FOXE1O00358 373 aaPredicted RBP19.4■□□□□ 0.7
VSX1-201ENST00000376707 AQP7O14520 342 aa19.4■□□□□ 0.7
VSX1-201ENST00000376707 STX16O14662 325 aa19.4■□□□□ 0.7
VSX1-201ENST00000376707 SUSD5O60279 629 aa19.4■□□□□ 0.7
VSX1-201ENST00000376707 CELA3AP09093 270 aa19.4■□□□□ 0.7
VSX1-201ENST00000376707 CAPN3P20807 821 aa19.4■□□□□ 0.7
VSX1-201ENST00000376707 TSNAXIP1Q2TAA8 658 aa19.4■□□□□ 0.7
VSX1-201ENST00000376707 PRAMEF20Q5VT98 475 aa19.4■□□□□ 0.7
VSX1-201ENST00000376707 DND1Q8IYX4 353 aaKnown RBP19.4■□□□□ 0.7
VSX1-201ENST00000376707 PTGR2Q8N8N7 351 aaPredicted RBP19.4■□□□□ 0.7
VSX1-201ENST00000376707 FAM13CQ8NE31 585 aa19.4■□□□□ 0.7
VSX1-201ENST00000376707 OR10Q1Q8NGQ4 319 aa19.4■□□□□ 0.7
VSX1-201ENST00000376707 WDR20Q8TBZ3 569 aa19.4■□□□□ 0.7
VSX1-201ENST00000376707 PAQR8Q8TEZ7 354 aa19.4■□□□□ 0.7
VSX1-201ENST00000376707 DCAKDQ8WVC6 231 aa19.4■□□□□ 0.7
VSX1-201ENST00000376707 WWTR1Q9GZV5 400 aa19.4■□□□□ 0.7
VSX1-201ENST00000376707 NOL11Q9H8H0 719 aaKnown RBP19.4■□□□□ 0.7
VSX1-201ENST00000376707 MCCC2Q9HCC0 563 aa19.4■□□□□ 0.7
VSX1-201ENST00000376707 SH2D2AQ9NP31 389 aa19.4■□□□□ 0.7
VSX1-201ENST00000376707 TNFRSF10DQ9UBN6 386 aa19.4■□□□□ 0.7
VSX1-201ENST00000376707 ACAD8Q9UKU7 415 aa19.4■□□□□ 0.7
VSX1-201ENST00000376707 BOKQ9UMX3 212 aaPredicted RBP19.4■□□□□ 0.7
VSX1-201ENST00000376707 PDZD2O15018 2839 aa19.4■□□□□ 0.7
VSX1-201ENST00000376707 CSMD2Q7Z408 3487 aa19.39■□□□□ 0.7
VSX1-201ENST00000376707 A0A087WUV0 522 aaPredicted RBP19.39■□□□□ 0.69
VSX1-201ENST00000376707 OR6C76A6NM76 312 aa19.39■□□□□ 0.69
VSX1-201ENST00000376707 TOXO94900 526 aa19.39■□□□□ 0.69
VSX1-201ENST00000376707 AIFM1O95831 613 aa19.39■□□□□ 0.69
VSX1-201ENST00000376707 GBAP04062 536 aa19.39■□□□□ 0.69
VSX1-201ENST00000376707 SERPINB3P29508 390 aa19.39■□□□□ 0.69
VSX1-201ENST00000376707 CCNG1P51959 295 aa19.39■□□□□ 0.69
VSX1-201ENST00000376707 SLC37A1P57057 533 aa19.39■□□□□ 0.69
VSX1-201ENST00000376707 KRTAP10-9P60411 292 aa19.39■□□□□ 0.69
VSX1-201ENST00000376707 OR52E8Q6IFG1 317 aa19.39■□□□□ 0.69
VSX1-201ENST00000376707 LYPD8Q6UX82 237 aa19.39■□□□□ 0.69
VSX1-201ENST00000376707 B3GNT6Q6ZMB0 384 aa19.39■□□□□ 0.69
VSX1-201ENST00000376707 FBXW8Q8N3Y1 598 aa19.39■□□□□ 0.69
VSX1-201ENST00000376707 SARAFQ96BY9 339 aa19.39■□□□□ 0.69
VSX1-201ENST00000376707 PHF21BQ96EK2 531 aa19.39■□□□□ 0.69
VSX1-201ENST00000376707 CDK15Q96Q40 435 aa19.39■□□□□ 0.69
VSX1-201ENST00000376707 SERPINI1Q99574 410 aa19.39■□□□□ 0.69
VSX1-201ENST00000376707 NPDC1Q9NQX5 325 aaPredicted RBP19.39■□□□□ 0.69
VSX1-201ENST00000376707 RYDENQ9NUL5 291 aaKnown RBP19.39■□□□□ 0.69
VSX1-201ENST00000376707 CNIH4Q9P003 139 aa19.39■□□□□ 0.69
VSX1-201ENST00000376707 XPR1Q9UBH6 696 aa19.39■□□□□ 0.69
VSX1-201ENST00000376707 TRGV5A0A0B4J1U4 118 aa19.38■□□□□ 0.69
VSX1-201ENST00000376707 FOXO6A8MYZ6 492 aa19.38■□□□□ 0.69
VSX1-201ENST00000376707 POC1B-GALNT4F8VUJ3 575 aa19.38■□□□□ 0.69
VSX1-201ENST00000376707 OR7A17O14581 309 aa19.38■□□□□ 0.69
VSX1-201ENST00000376707 HCN1O60741 890 aa19.38■□□□□ 0.69
VSX1-201ENST00000376707 SEMA3DO95025 777 aa19.38■□□□□ 0.69
VSX1-201ENST00000376707 FBXO45P0C2W1 286 aa19.38■□□□□ 0.69
VSX1-201ENST00000376707 SLC35E2P0CK97 266 aa19.38■□□□□ 0.69
VSX1-201ENST00000376707 POU3F2P20265 443 aaPredicted RBP19.38■□□□□ 0.69
VSX1-201ENST00000376707 GALNSP34059 522 aa19.38■□□□□ 0.69
VSX1-201ENST00000376707 TFF3Q07654 80 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 187.3 ms