RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 PCDH17O14917 1159 aa21.49■■□□□ 1.03
HLA-C-202ENST00000376237 ANP32DO95626 131 aa21.49■■□□□ 1.03
HLA-C-202ENST00000376237 CPSF4O95639 269 aaKnown RBP21.49■■□□□ 1.03
HLA-C-202ENST00000376237 ZCCHC18P0CG32 403 aa21.49■■□□□ 1.03
HLA-C-202ENST00000376237 HOXD11P31277 338 aaPredicted RBP21.49■■□□□ 1.03
HLA-C-202ENST00000376237 NUDT2P50583 147 aa21.49■■□□□ 1.03
HLA-C-202ENST00000376237 EMP2P54851 167 aa21.49■■□□□ 1.03
HLA-C-202ENST00000376237 HBA1P69905 142 aa21.49■■□□□ 1.03
HLA-C-202ENST00000376237 ID2Q02363 134 aa21.49■■□□□ 1.03
HLA-C-202ENST00000376237 NSDHLQ15738 373 aa21.49■■□□□ 1.03
HLA-C-202ENST00000376237 ZNF750Q32MQ0 723 aa21.49■■□□□ 1.03
HLA-C-202ENST00000376237 TRMT5Q32P41 509 aaKnown RBP21.49■■□□□ 1.03
HLA-C-202ENST00000376237 LRIF1Q5T3J3 769 aa21.49■■□□□ 1.03
HLA-C-202ENST00000376237 OR4A15Q8NGL6 344 aa21.49■■□□□ 1.03
HLA-C-202ENST00000376237 DGAT2Q96PD7 388 aa21.49■■□□□ 1.03
HLA-C-202ENST00000376237 GPR87Q9BY21 358 aa21.49■■□□□ 1.03
HLA-C-202ENST00000376237 C1orf21Q9H246 121 aa21.49■■□□□ 1.03
HLA-C-202ENST00000376237 SOX17Q9H6I2 414 aaPredicted RBP21.49■■□□□ 1.03
HLA-C-202ENST00000376237 SEMA3GQ9NS98 782 aa21.49■■□□□ 1.03
HLA-C-202ENST00000376237 FER1L5A0AVI2 2057 aa21.48■■□□□ 1.03
HLA-C-202ENST00000376237 TCRBV16S1A1N1A0A5B0 115 aa21.48■■□□□ 1.03
HLA-C-202ENST00000376237 TRABD2BA6NFA1 517 aa21.48■■□□□ 1.03
HLA-C-202ENST00000376237 B2RBV5 119 aa21.48■■□□□ 1.03
HLA-C-202ENST00000376237 OR10H2O60403 315 aa21.48■■□□□ 1.03
HLA-C-202ENST00000376237 CNOT3O75175 753 aaKnown RBP21.48■■□□□ 1.03
HLA-C-202ENST00000376237 IFI6P09912 130 aa21.48■■□□□ 1.03
HLA-C-202ENST00000376237 EFNA1P20827 205 aaPredicted RBP21.48■■□□□ 1.03
HLA-C-202ENST00000376237 GPC1P35052 558 aa21.48■■□□□ 1.03
HLA-C-202ENST00000376237 STAT5AP42229 794 aa21.48■■□□□ 1.03
HLA-C-202ENST00000376237 STT3AP46977 705 aa21.48■■□□□ 1.03
HLA-C-202ENST00000376237 ID4P47928 161 aa21.48■■□□□ 1.03
HLA-C-202ENST00000376237 RPS15P62841 145 aaKnown RBP21.48■■□□□ 1.03
HLA-C-202ENST00000376237 MXRA7P84157 204 aa21.48■■□□□ 1.03
HLA-C-202ENST00000376237 ZNF551Q7Z340 670 aaPredicted RBP21.48■■□□□ 1.03
HLA-C-202ENST00000376237 DHDDSQ86SQ9 333 aa21.48■■□□□ 1.03
HLA-C-202ENST00000376237 OR2Y1Q8NGV0 311 aa21.48■■□□□ 1.03
HLA-C-202ENST00000376237 METTL21AQ8WXB1 218 aa21.48■■□□□ 1.03
HLA-C-202ENST00000376237 PHF12Q96QT6 1004 aa21.48■■□□□ 1.03
HLA-C-202ENST00000376237 INPP5KQ9BT40 448 aa21.48■■□□□ 1.03
HLA-C-202ENST00000376237 CRB3Q9BUF7 120 aa21.48■■□□□ 1.03
HLA-C-202ENST00000376237 PAIP1Q9H074 479 aaKnown RBP21.48■■□□□ 1.03
HLA-C-202ENST00000376237 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.48■■□□□ 1.036e-7■■□□□ 11.9
HLA-C-202ENST00000376237 C3orf18Q9UK00 162 aa21.48■■□□□ 1.03
HLA-C-202ENST00000376237 VPS4AQ9UN37 437 aa21.48■■□□□ 1.03
HLA-C-202ENST00000376237 A0A1W2PS29 197 aa21.47■■□□□ 1.03
HLA-C-202ENST00000376237 OR2W5A6NFC9 320 aa21.47■■□□□ 1.03
HLA-C-202ENST00000376237 TGFBR3LH3BV60 316 aa21.47■■□□□ 1.03
HLA-C-202ENST00000376237 KLF7O75840 302 aaPredicted RBP21.47■■□□□ 1.03
HLA-C-202ENST00000376237 DUSP2Q05923 314 aa21.47■■□□□ 1.03
HLA-C-202ENST00000376237 HSPB3Q12988 150 aa21.47■■□□□ 1.03
HLA-C-202ENST00000376237 LACTB2Q53H82 288 aaPredicted RBP21.47■■□□□ 1.03
HLA-C-202ENST00000376237 DLEU7Q6UYE1 221 aa21.47■■□□□ 1.03
HLA-C-202ENST00000376237 SHISA6Q6ZSJ9 500 aa21.47■■□□□ 1.03
HLA-C-202ENST00000376237 ZNF621Q6ZSS3 439 aa21.47■■□□□ 1.03
HLA-C-202ENST00000376237 DTX1Q86Y01 620 aa21.47■■□□□ 1.03
HLA-C-202ENST00000376237 CT55Q8WUE5 264 aa21.47■■□□□ 1.03
HLA-C-202ENST00000376237 LRRC58Q96CX6 371 aa21.47■■□□□ 1.03
HLA-C-202ENST00000376237 ZNF578Q96N58 590 aaPredicted RBP21.47■■□□□ 1.03
HLA-C-202ENST00000376237 HOPXQ9BPY8 73 aaPredicted RBP21.47■■□□□ 1.03
HLA-C-202ENST00000376237 KLK13Q9UKR3 277 aa21.47■■□□□ 1.03
HLA-C-202ENST00000376237 FARSAQ9Y285 508 aaKnown RBP21.47■■□□□ 1.03
HLA-C-202ENST00000376237 CFAP54Q96N23 3096 aa21.47■■□□□ 1.03
HLA-C-202ENST00000376237 BRINP1O60477 761 aa21.46■■□□□ 1.03
HLA-C-202ENST00000376237 ALOX12BO75342 701 aa21.46■■□□□ 1.03
HLA-C-202ENST00000376237 ABCB1P08183 1280 aaPredicted RBP21.46■■□□□ 1.03
HLA-C-202ENST00000376237 ENDOVQ8N8Q3 282 aaKnown RBP21.46■■□□□ 1.03
HLA-C-202ENST00000376237 ZNF675Q8TD23 568 aa21.46■■□□□ 1.03
HLA-C-202ENST00000376237 SLAMF8Q9P0V8 285 aa21.46■■□□□ 1.03
HLA-C-202ENST00000376237 C19orf25Q9UFG5 118 aaPredicted RBP21.46■■□□□ 1.03
HLA-C-202ENST00000376237 CROTQ9UKG9 612 aa21.46■■□□□ 1.03
HLA-C-202ENST00000376237 WASF3Q9UPY6 502 aa21.46■■□□□ 1.03
HLA-C-202ENST00000376237 ERVK-11Q9UQG0 969 aa21.46■■□□□ 1.03
HLA-C-202ENST00000376237 PTRH2Q9Y3E5 179 aaKnown RBP21.46■■□□□ 1.03
HLA-C-202ENST00000376237 NEUROG3Q9Y4Z2 214 aa21.46■■□□□ 1.03
HLA-C-202ENST00000376237 PCDHB14Q9Y5E9 798 aa21.46■■□□□ 1.03
HLA-C-202ENST00000376237 PLOD2O00469 737 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 DYRK3O43781 588 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 IGHEP01854 428 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 IFNA16P05015 189 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 NT5EP21589 574 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 FOLR3P41439 243 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 CDKN2CP42773 168 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 ELAVL1Q15717 326 aaKnown RBP21.45■■□□□ 1.02
HLA-C-202ENST00000376237 C6orf163Q5TEZ5 329 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 C16orf89Q6UX73 402 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 TMEM64Q6YI46 380 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 OR9A2Q8NGT5 310 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 RIT1Q92963 219 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 TSLPQ969D9 159 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 NKD1Q969G9 470 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 MOAP1Q96BY2 351 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 CGREF1Q99674 301 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 SCNM1Q9BWG6 230 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 C3orf14Q9HBI5 128 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 ADAP2Q9NPF8 381 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 TAS2R1Q9NYW7 299 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 KCND3Q9UK17 655 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 LIPCP11150 499 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 UQCRC2P22695 453 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 PTPN4P29074 926 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms