RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 NAB1Q13506 487 aa21.35■■□□□ 1.01
C9orf47-202ENST00000375850 NTRK2Q16620 822 aa21.35■■□□□ 1.01
C9orf47-202ENST00000375850 ULK2Q8IYT8 1036 aa21.35■■□□□ 1.01
C9orf47-202ENST00000375850 RHEBL1Q8TAI7 183 aa21.35■■□□□ 1.01
C9orf47-202ENST00000375850 RIT1Q92963 219 aa21.35■■□□□ 1.01
C9orf47-202ENST00000375850 PPWD1Q96BP3 646 aaKnown RBP21.35■■□□□ 1.01
C9orf47-202ENST00000375850 GAL3ST4Q96RP7 486 aa21.35■■□□□ 1.01
C9orf47-202ENST00000375850 DOHHQ9BU89 302 aa21.35■■□□□ 1.01
C9orf47-202ENST00000375850 POLDIP3Q9BY77 421 aaKnown RBP21.35■■□□□ 1.01
C9orf47-202ENST00000375850 WWTR1Q9GZV5 400 aa21.35■■□□□ 1.01
C9orf47-202ENST00000375850 IKBKGQ9Y6K9 419 aa21.35■■□□□ 1.01
C9orf47-202ENST00000375850 LRRC3CA6NJW4 275 aa21.34■■□□□ 1.01
C9orf47-202ENST00000375850 PLPP1O14494 284 aa21.34■■□□□ 1.01
C9orf47-202ENST00000375850 PROM1O43490 865 aa21.34■■□□□ 1.01
C9orf47-202ENST00000375850 SH3BGRLO75368 114 aa21.34■■□□□ 1.01
C9orf47-202ENST00000375850 CD99P14209 185 aa21.34■■□□□ 1.01
C9orf47-202ENST00000375850 TMED10P49755 219 aaKnown RBP21.34■■□□□ 1.01
C9orf47-202ENST00000375850 SLC37A1P57057 533 aa21.34■■□□□ 1.01
C9orf47-202ENST00000375850 HERVK_113P63132 956 aa21.34■■□□□ 1.01
C9orf47-202ENST00000375850 ERVK-8P63133 956 aa21.34■■□□□ 1.01
C9orf47-202ENST00000375850 CUL3Q13618 768 aa21.34■■□□□ 1.01
C9orf47-202ENST00000375850 DDX39BQ13838 428 aaKnown RBP21.34■■□□□ 1.01
C9orf47-202ENST00000375850 PRAMEF20Q5VT98 475 aa21.34■■□□□ 1.01
C9orf47-202ENST00000375850 TMEM198Q66K66 360 aa21.34■■□□□ 1.01
C9orf47-202ENST00000375850 TP53INP1Q96A56 240 aa21.34■■□□□ 1.01
C9orf47-202ENST00000375850 ZNF597Q96LX8 424 aa21.34■■□□□ 1.01
C9orf47-202ENST00000375850 SECISBP2Q96T21 854 aaKnown RBP21.34■■□□□ 1.01
C9orf47-202ENST00000375850 TMUB1Q9BVT8 246 aa21.34■■□□□ 1.01
C9orf47-202ENST00000375850 ERVK-6Q9BXR3 956 aa21.34■■□□□ 1.01
C9orf47-202ENST00000375850 SNX15Q9NRS6 342 aa21.34■■□□□ 1.01
C9orf47-202ENST00000375850 CNOT11Q9UKZ1 510 aaKnown RBP21.34■■□□□ 1.01
C9orf47-202ENST00000375850 ERVK-19Q9WJR5 959 aa21.34■■□□□ 1.01
C9orf47-202ENST00000375850 H0YIV9 168 aa21.33■■□□□ 1.01
C9orf47-202ENST00000375850 UBXN8O00124 270 aa21.33■■□□□ 1.01
C9orf47-202ENST00000375850 KRT38O76015 456 aa21.33■■□□□ 1.01
C9orf47-202ENST00000375850 C1QAP02745 245 aa21.33■■□□□ 1.01
C9orf47-202ENST00000375850 RFPL3SP0C7P2 107 aa21.33■■□□□ 1.01
C9orf47-202ENST00000375850 SLC35E2P0CK97 266 aa21.33■■□□□ 1.01
C9orf47-202ENST00000375850 STX2P32856 288 aa21.33■■□□□ 1.01
C9orf47-202ENST00000375850 ASCL1P50553 236 aa21.33■■□□□ 1.01
C9orf47-202ENST00000375850 RPP38P78345 283 aaKnown RBP21.33■■□□□ 1.01
C9orf47-202ENST00000375850 CAV1Q03135 178 aa21.33■■□□□ 1.01
C9orf47-202ENST00000375850 ZNF267Q14586 743 aaPredicted RBP21.33■■□□□ 1.01
C9orf47-202ENST00000375850 SLMAPQ14BN4 828 aa21.33■■□□□ 1.01
C9orf47-202ENST00000375850 EBPQ15125 230 aaKnown RBP21.33■■□□□ 1.01
C9orf47-202ENST00000375850 FBXL19-AS1Q494R0 122 aa21.33■■□□□ 1.01
C9orf47-202ENST00000375850 C18orf63Q68DL7 685 aa21.33■■□□□ 1.01
C9orf47-202ENST00000375850 MRM1Q6IN84 353 aaKnown RBP21.33■■□□□ 1.01
C9orf47-202ENST00000375850 METTL2BQ6P1Q9 378 aaKnown RBP21.33■■□□□ 1.01
C9orf47-202ENST00000375850 CYP20A1Q6UW02 462 aa21.33■■□□□ 1.01
C9orf47-202ENST00000375850 PM20D2Q8IYS1 436 aa21.33■■□□□ 1.01
C9orf47-202ENST00000375850 TEX9Q8N6V9 391 aa21.33■■□□□ 1.01
C9orf47-202ENST00000375850 OR10G3Q8NGC4 313 aa21.33■■□□□ 1.01
C9orf47-202ENST00000375850 SORBS1Q9BX66 1292 aaKnown RBP21.33■■□□□ 1.01
C9orf47-202ENST00000375850 DDX31Q9H8H2 851 aaKnown RBP21.33■■□□□ 1.01
C9orf47-202ENST00000375850 ACTR8Q9H981 624 aa21.33■■□□□ 1.01
C9orf47-202ENST00000375850 PROK2Q9HC23 129 aa21.33■■□□□ 1.01
C9orf47-202ENST00000375850 ZNF629Q9UEG4 869 aaPredicted RBP21.33■■□□□ 1.01
C9orf47-202ENST00000375850 MTRF1LQ9UGC7 380 aaKnown RBP21.33■■□□□ 1.01
C9orf47-202ENST00000375850 ACOT9Q9Y305 439 aa21.33■■□□□ 1.01
C9orf47-202ENST00000375850 HRKO00198 91 aa21.32■■□□□ 1
C9orf47-202ENST00000375850 SNX4O95219 450 aa21.32■■□□□ 1
C9orf47-202ENST00000375850 EPPINO95925 133 aa21.32■■□□□ 1
C9orf47-202ENST00000375850 NR2F6P10588 404 aa21.32■■□□□ 1
C9orf47-202ENST00000375850 TIMP3P35625 211 aa21.32■■□□□ 1
C9orf47-202ENST00000375850 PIK3CGP48736 1102 aa21.32■■□□□ 1
C9orf47-202ENST00000375850 HNRNPH2P55795 449 aaKnown RBP21.32■■□□□ 1
C9orf47-202ENST00000375850 RPS6KA2Q15349 733 aa21.32■■□□□ 1
C9orf47-202ENST00000375850 FAM83EQ2M2I3 478 aa21.32■■□□□ 1
C9orf47-202ENST00000375850 KBTBD12Q3ZCT8 623 aa21.32■■□□□ 1
C9orf47-202ENST00000375850 DGAT2L6Q6ZPD8 337 aa21.32■■□□□ 1
C9orf47-202ENST00000375850 MYLK4Q86YV6 388 aaPredicted RBP21.32■■□□□ 1
C9orf47-202ENST00000375850 LACC1Q8IV20 430 aa21.32■■□□□ 1
C9orf47-202ENST00000375850 ZZZ3Q8IYH5 903 aa21.32■■□□□ 1
C9orf47-202ENST00000375850 PPM1NQ8N819 430 aa21.32■■□□□ 1
C9orf47-202ENST00000375850 FAM222BQ8WU58 562 aa21.32■■□□□ 1
C9orf47-202ENST00000375850 RMND5BQ96G75 393 aaPredicted RBP21.32■■□□□ 1
C9orf47-202ENST00000375850 JSRP1Q96MG2 331 aaPredicted RBP21.32■■□□□ 1
C9orf47-202ENST00000375850 MTERF1Q99551 399 aaKnown RBP21.32■■□□□ 1
C9orf47-202ENST00000375850 SLC6A15Q9H2J7 730 aa21.32■■□□□ 1
C9orf47-202ENST00000375850 DPH5Q9H2P9 285 aa21.32■■□□□ 1
C9orf47-202ENST00000375850 CLEC4MQ9H2X3 399 aaPredicted RBP21.32■■□□□ 1
C9orf47-202ENST00000375850 KCNF1Q9H3M0 494 aa21.32■■□□□ 1
C9orf47-202ENST00000375850 RASSF1Q9NS23 344 aa21.32■■□□□ 1
C9orf47-202ENST00000375850 ST6GALNAC2Q9UJ37 374 aa21.32■■□□□ 1
C9orf47-202ENST00000375850 A0A087X1B8 175 aa21.31■■□□□ 1
C9orf47-202ENST00000375850 A0A0A6YYD5 115 aa21.31■■□□□ 1
C9orf47-202ENST00000375850 C2orf92A0A1B0GVN3 265 aa21.31■■□□□ 1
C9orf47-202ENST00000375850 CDH16O75309 829 aa21.31■■□□□ 1
C9orf47-202ENST00000375850 TRIM3O75382 744 aaPredicted RBP21.31■■□□□ 1
C9orf47-202ENST00000375850 GDF1P27539 372 aa21.31■■□□□ 1
C9orf47-202ENST00000375850 GPX6P59796 221 aa21.31■■□□□ 1
C9orf47-202ENST00000375850 DLG1Q12959 904 aa21.31■■□□□ 1
C9orf47-202ENST00000375850 SETDB1Q15047 1291 aa21.31■■□□□ 1
C9orf47-202ENST00000375850 FLYWCH1Q4VC44 716 aa21.31■■□□□ 1
C9orf47-202ENST00000375850 HLA-DQA1Q5Y7H0 255 aa21.31■■□□□ 1
C9orf47-202ENST00000375850 CMC1Q7Z7K0 106 aa21.31■■□□□ 1
C9orf47-202ENST00000375850 NUDT13Q86X67 352 aa21.31■■□□□ 1
C9orf47-202ENST00000375850 TGIF2LYQ8IUE0 185 aa21.31■■□□□ 1
C9orf47-202ENST00000375850 DIO2Q92813 273 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms