RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 GCM2O75603 506 aaPredicted RBP8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 EGFP01133 1207 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 MT-ND1P03886 318 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 FUCA1P04066 466 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 H1F0P07305 194 aaKnown RBP8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 ASGR2P07307 311 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 NR2F6P10588 404 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 NR2F1P10589 423 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 OSMP13725 252 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 ACVR2AP27037 513 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 PRKAR1BP31321 381 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 SLC5A2P31639 672 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 BCL6P41182 706 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 CAPZA2P47755 286 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 NCBP2P52298 156 aaKnown RBP eCLIP8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 SNRPGP62308 76 aaKnown RBP8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 MC1RQ01726 317 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 SPIBQ01892 262 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 MEF2AQ02078 507 aaPredicted RBP8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 PMS2P3Q13401 168 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 SMAD4Q13485 552 aaKnown RBP8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 RAPSNQ13702 412 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 TBCEQ15813 527 aaPredicted RBP8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 NPTX1Q15818 432 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 ZNF829Q3KNS6 432 aaPredicted RBP8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 PUS10Q3MIT2 529 aaKnown RBP8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 ZIK1Q3SY52 487 aaPredicted RBP8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 EIPR1Q53HC9 387 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 UBE2UQ5VVX9 321 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 KIAA0895LQ68EN5 471 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 ANKRD26P1Q6NSI1 321 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 TREML4Q6UXN2 200 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 ZNF852Q6ZMS4 543 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 GDPGP1Q6ZNW5 385 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 UBE3DQ7Z6J8 389 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 VTCN1Q7Z7D3 282 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 RNF175Q8N4F7 328 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 SLC44A3Q8N4M1 653 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 ZNF540Q8NDQ6 660 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 FAM46DQ8NEK8 389 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 CADM4Q8NFZ8 388 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 OR4K14Q8NGD5 310 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 NUDT8Q8WV74 236 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 APOBEC4Q8WW27 367 aaKnown RBP8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 FAM3CQ92520 227 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 CIDECQ96AQ7 238 aaPredicted RBP8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 C12orf43Q96C57 262 aaKnown RBP8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 SHDQ96IW2 340 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 BMFQ96LC9 184 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 ALPK1Q96QP1 1244 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 FEVQ99581 238 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 ZFYVE21Q9BQ24 234 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 C17orf62Q9BQA9 187 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 ACTRT3Q9BYD9 372 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 SPNS1Q9H2V7 528 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 GLIPR2Q9H4G4 154 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 RIBC2Q9H4K1 309 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 ZNF576Q9H609 170 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 FGF22Q9HCT0 170 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 ENAMQ9NRM1 1142 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 TM7SF3Q9NS93 570 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 SIRT3Q9NTG7 399 aaPredicted RBP8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 ZCCHC3Q9NUD5 404 aaKnown RBP8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 ACER3Q9NUN7 267 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 CLN6Q9NWW5 311 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 IMPAD1Q9NX62 359 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 SEC14L4Q9UDX3 406 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 EPHA6Q9UF33 1036 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 MOSPD1Q9UJG1 213 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 CES1P1Q9UKY3 287 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 RAB23Q9ULC3 237 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 KCNK6Q9Y257 313 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 B3GNT3Q9Y2A9 372 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 PRKAB1Q9Y478 270 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 SNX8Q9Y5X2 465 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 U3KQV3 271 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 CROCCQ5TZA2 2017 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 DOCK8Q8NF50 2099 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 A0A0J9YY10 115 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 SPTY2D1-AS1A0A0U1RR47 76 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 EPOPA6NHQ4 379 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 TMEM229AB2RXF0 380 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 H3BMQ9 156 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 SAP18O00422 153 aaKnown RBP8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 SLC31A1O15431 190 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 TMPRSS11DO60235 418 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 LCMT2O60294 686 aaKnown RBP8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 GDF9O60383 454 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 FMO6PO60774 539 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 OR6B1O95007 311 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 LGI1O95970 557 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 BCL10O95999 233 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 THBS1P07996 1170 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 SRFP11831 508 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 CD247P20963 164 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 CBLP22681 906 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 GALNSP34059 522 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 SOX11P35716 441 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 PIGAP37287 484 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 ACTR1BP42025 376 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms