RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 RGS9BPQ6ZS82 235 aa17.12■□□□□ 0.33
PBX3-205ENST00000373492 MMP21Q8N119 569 aa17.12■□□□□ 0.33
PBX3-205ENST00000373492 LIX1Q8N485 282 aa17.12■□□□□ 0.33
PBX3-205ENST00000373492 MORN4Q8NDC4 146 aa17.12■□□□□ 0.33
PBX3-205ENST00000373492 B3GNT7Q8NFL0 401 aa17.12■□□□□ 0.33
PBX3-205ENST00000373492 ART5Q96L15 291 aa17.12■□□□□ 0.33
PBX3-205ENST00000373492 TSSK3Q96PN8 268 aa17.12■□□□□ 0.33
PBX3-205ENST00000373492 C1orf50Q9BV19 199 aa17.12■□□□□ 0.33
PBX3-205ENST00000373492 AKTIPQ9H8T0 292 aa17.12■□□□□ 0.33
PBX3-205ENST00000373492 KCNK13Q9HB14 408 aa17.12■□□□□ 0.33
PBX3-205ENST00000373492 MMP25Q9NPA2 562 aa17.12■□□□□ 0.33
PBX3-205ENST00000373492 SLCO1B3Q9NPD5 702 aa17.12■□□□□ 0.33
PBX3-205ENST00000373492 ENTPD4Q9Y227 616 aa17.12■□□□□ 0.33
PBX3-205ENST00000373492 ITGAMP11215 1152 aa17.11■□□□□ 0.33
PBX3-205ENST00000373492 BCKDHAP12694 445 aa17.11■□□□□ 0.33
PBX3-205ENST00000373492 CPMP14384 443 aa17.11■□□□□ 0.33
PBX3-205ENST00000373492 DDX5P17844 614 aaKnown RBP17.11■□□□□ 0.33
PBX3-205ENST00000373492 LBPP18428 481 aa17.11■□□□□ 0.33
PBX3-205ENST00000373492 CSNK2A2P19784 350 aaPredicted RBP17.11■□□□□ 0.33
PBX3-205ENST00000373492 TACR1P25103 407 aa17.11■□□□□ 0.33
PBX3-205ENST00000373492 GALNSP34059 522 aa17.11■□□□□ 0.33
PBX3-205ENST00000373492 CLCN2P51788 898 aa17.11■□□□□ 0.33
PBX3-205ENST00000373492 ERVK-8P63133 956 aa17.11■□□□□ 0.33
PBX3-205ENST00000373492 EMX2Q04743 252 aa17.11■□□□□ 0.33
PBX3-205ENST00000373492 IL23RQ5VWK5 629 aa17.11■□□□□ 0.33
PBX3-205ENST00000373492 NFAM1Q8NET5 270 aaPredicted RBP17.11■□□□□ 0.33
PBX3-205ENST00000373492 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.11■□□□□ 0.33
PBX3-205ENST00000373492 PTPMT1Q8WUK0 201 aaPredicted RBP17.11■□□□□ 0.33
PBX3-205ENST00000373492 EXOSC8Q96B26 276 aaKnown RBP17.11■□□□□ 0.33
PBX3-205ENST00000373492 VMP1Q96GC9 406 aa17.11■□□□□ 0.33
PBX3-205ENST00000373492 EGLN2Q96KS0 407 aa17.11■□□□□ 0.33
PBX3-205ENST00000373492 BAIAP2L1Q9UHR4 511 aa17.11■□□□□ 0.33
PBX3-205ENST00000373492 EML6Q6ZMW3 1958 aa17.11■□□□□ 0.33
PBX3-205ENST00000373492 EXPH5Q8NEV8 1989 aa17.11■□□□□ 0.33
PBX3-205ENST00000373492 CNTRLQ7Z7A1 2325 aa17.1■□□□□ 0.33
PBX3-205ENST00000373492 J3QKU1 62 aa17.1■□□□□ 0.33
PBX3-205ENST00000373492 SDHDO14521 159 aa17.1■□□□□ 0.33
PBX3-205ENST00000373492 CELA2AP08217 269 aa17.1■□□□□ 0.33
PBX3-205ENST00000373492 RPL3P39023 403 aaKnown RBP17.1■□□□□ 0.33
PBX3-205ENST00000373492 FEN1P39748 380 aaKnown RBP17.1■□□□□ 0.33
PBX3-205ENST00000373492 IGFL2Q6UWQ7 119 aa17.1■□□□□ 0.33
PBX3-205ENST00000373492 FAM47EQ6ZV65 393 aa17.1■□□□□ 0.33
PBX3-205ENST00000373492 FAM9CQ8IZT9 166 aa17.1■□□□□ 0.33
PBX3-205ENST00000373492 LRRC25Q8N386 305 aaPredicted RBP17.1■□□□□ 0.33
PBX3-205ENST00000373492 ZADH2Q8N4Q0 377 aa17.1■□□□□ 0.33
PBX3-205ENST00000373492 RBMXL3Q8N7X1 1067 aaKnown RBP17.1■□□□□ 0.33
PBX3-205ENST00000373492 BRIX1Q8TDN6 353 aaKnown RBP17.1■□□□□ 0.33
PBX3-205ENST00000373492 RIT1Q92963 219 aa17.1■□□□□ 0.33
PBX3-205ENST00000373492 NCLNQ969V3 563 aa17.1■□□□□ 0.33
PBX3-205ENST00000373492 PPWD1Q96BP3 646 aaKnown RBP17.1■□□□□ 0.33
PBX3-205ENST00000373492 CNRIP1Q96F85 164 aaPredicted RBP17.1■□□□□ 0.33
PBX3-205ENST00000373492 LMF1Q96S06 567 aa17.1■□□□□ 0.33
PBX3-205ENST00000373492 OR8D2Q9GZM6 311 aa17.1■□□□□ 0.33
PBX3-205ENST00000373492 EPN3Q9H201 632 aa17.1■□□□□ 0.33
PBX3-205ENST00000373492 SLC35C2Q9NQQ7 365 aa17.1■□□□□ 0.33
PBX3-205ENST00000373492 ASIC5Q9NY37 505 aa17.1■□□□□ 0.33
PBX3-205ENST00000373492 COPS7AQ9UBW8 275 aa17.1■□□□□ 0.33
PBX3-205ENST00000373492 TEKT2Q9UIF3 430 aa17.1■□□□□ 0.33
PBX3-205ENST00000373492 PPIEQ9UNP9 301 aaKnown RBP17.1■□□□□ 0.33
PBX3-205ENST00000373492 USH1CQ9Y6N9 552 aa17.1■□□□□ 0.33
PBX3-205ENST00000373492 GOLGA8QA0A0J9YX86 632 aa17.09■□□□□ 0.33
PBX3-205ENST00000373492 GOLGA8OA6NCC3 632 aa17.09■□□□□ 0.33
PBX3-205ENST00000373492 GOLGA8NF8WBI6 632 aa17.09■□□□□ 0.33
PBX3-205ENST00000373492 NT5EP21589 574 aa17.09■□□□□ 0.33
PBX3-205ENST00000373492 HPCAL1P37235 193 aa17.09■□□□□ 0.33
PBX3-205ENST00000373492 SPRED3Q2MJR0 410 aa17.09■□□□□ 0.33
PBX3-205ENST00000373492 NADK2Q4G0N4 442 aa17.09■□□□□ 0.33
PBX3-205ENST00000373492 CRB2Q5IJ48 1285 aa17.09■□□□□ 0.33
PBX3-205ENST00000373492 ISLR2Q6UXK2 745 aa17.09■□□□□ 0.33
PBX3-205ENST00000373492 LARP4Q71RC2 724 aaKnown RBP eCLIP17.09■□□□□ 0.33
PBX3-205ENST00000373492 R3HCC1LQ7Z5L2 792 aaKnown RBP17.09■□□□□ 0.33
PBX3-205ENST00000373492 TICAM1Q8IUC6 712 aa17.09■□□□□ 0.33
PBX3-205ENST00000373492 SIRT6Q8N6T7 355 aa17.09■□□□□ 0.33
PBX3-205ENST00000373492 APCDD1LQ8NCL9 501 aa17.09■□□□□ 0.33
PBX3-205ENST00000373492 OR1N1Q8NGS0 311 aa17.09■□□□□ 0.33
PBX3-205ENST00000373492 CLHC1Q8NHS4 586 aa17.09■□□□□ 0.33
PBX3-205ENST00000373492 SLC2A12Q8TD20 617 aa17.09■□□□□ 0.33
PBX3-205ENST00000373492 ELP5Q8TE02 316 aa17.09■□□□□ 0.33
PBX3-205ENST00000373492 GFM2Q969S9 779 aaKnown RBP17.09■□□□□ 0.33
PBX3-205ENST00000373492 PNPLA2Q96AD5 504 aa17.09■□□□□ 0.33
PBX3-205ENST00000373492 MTERF3Q96E29 417 aa17.09■□□□□ 0.33
PBX3-205ENST00000373492 BBS4Q96RK4 519 aa17.09■□□□□ 0.33
PBX3-205ENST00000373492 CNPPD1Q9BV87 410 aa17.09■□□□□ 0.33
PBX3-205ENST00000373492 DEFB126Q9BYW3 111 aa17.09■□□□□ 0.33
PBX3-205ENST00000373492 REEP4Q9H6H4 257 aa17.09■□□□□ 0.33
PBX3-205ENST00000373492 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.09■□□□□ 0.33
PBX3-205ENST00000373492 PTGFRNQ9P2B2 879 aa17.09■□□□□ 0.33
PBX3-205ENST00000373492 MAPRE3Q9UPY8 281 aa17.09■□□□□ 0.33
PBX3-205ENST00000373492 HELZ2Q9BYK8 2649 aaKnown RBP17.09■□□□□ 0.33
PBX3-205ENST00000373492 A8MUI8 341 aa17.08■□□□□ 0.32
PBX3-205ENST00000373492 TCP11X1B4DZS4 312 aa17.08■□□□□ 0.32
PBX3-205ENST00000373492 AKAP10O43572 662 aa17.08■□□□□ 0.32
PBX3-205ENST00000373492 LRATO95237 230 aa17.08■□□□□ 0.32
PBX3-205ENST00000373492 TGDSO95455 350 aa17.08■□□□□ 0.32
PBX3-205ENST00000373492 ATP1B1P05026 303 aa17.08■□□□□ 0.32
PBX3-205ENST00000373492 PCSK2P16519 638 aa17.08■□□□□ 0.32
PBX3-205ENST00000373492 EPHA3P29320 983 aa17.08■□□□□ 0.32
PBX3-205ENST00000373492 NTSP30990 170 aa17.08■□□□□ 0.32
PBX3-205ENST00000373492 MPIP34949 423 aa17.08■□□□□ 0.32
PBX3-205ENST00000373492 TLE1Q04724 770 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms