RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 YARS2Q9Y2Z4 477 aaKnown RBP17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 OR14I1A6ND48 311 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 SMIM23A6NLE4 172 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 FIGNL2A6NMB9 653 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 FOXE1O00358 373 aaPredicted RBP17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 PLPP1O14494 284 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 BCKDKO14874 412 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 CTNSO60931 367 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 CTAG2O75638 210 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 DRD2P14416 443 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 KRT15P19012 456 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 CPN2P22792 545 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 SLCO1A2P46721 670 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 HERVK_113P63132 956 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 STX4Q12846 297 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 IFT88Q13099 833 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 CUL3Q13618 768 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 GGTA1PQ4G0N0 100 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 FRG2Q64ET8 278 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 MILR1Q7Z6M3 343 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 GPALPP1Q8IXQ4 340 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 PSD4Q8NDX1 1056 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 OR4F6Q8NGB9 312 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 OR5M9Q8NGP3 310 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 VMP1Q96GC9 406 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 FRG2BQ96QU4 278 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 SERPINI1Q99574 410 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 SORBS1Q9BX66 1292 aaKnown RBP17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 C1QTNF3Q9BXJ4 246 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 ERVK-6Q9BXR3 956 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 ADAP2Q9NPF8 381 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 PNPLA3Q9NST1 481 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 MS4A12Q9NXJ0 267 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 PSD3Q9NYI0 1048 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 PHF11Q9UIL8 331 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 ST6GALNAC2Q9UJ37 374 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 L3MBTL1Q9Y468 752 aa17.76■□□□□ 0.43
TRAPPC3-204ENST00000373166 FAM166BA8MTA8 275 aa17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 A8MVJ9 347 aa17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 TGFBR3LH3BV60 316 aa17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 GLRA3O75311 464 aa17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 SLU7O95391 586 aaKnown RBP17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 IFNA16P05015 189 aa17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 ATP5F1P24539 256 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 ZFP36L2P47974 494 aaKnown RBP17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 NR0B1P51843 470 aaKnown RBP17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 NEK2P51955 445 aa17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 SLAMF1Q13291 335 aa17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 CEBPEQ15744 281 aa17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 ZNF585AQ6P3V2 769 aa17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 B3GNT6Q6ZMB0 384 aa17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 SLC22A16Q86VW1 577 aa17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 NUDT13Q86X67 352 aa17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 TDRPQ86YL5 185 aa17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 SLC22A9Q8IVM8 553 aa17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 ZCCHC7Q8N3Z6 543 aaKnown RBP17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 OR2M7Q8NG81 312 aa17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 TTYH2Q9BSA4 534 aa17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 ELOVL6Q9H5J4 265 aa17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 ZDHHC11Q9H8X9 412 aa17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 DEPPQ9NTK1 212 aa17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 HPF1Q9NWY4 346 aa17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 LYARQ9NX58 379 aaKnown RBP17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 DCDC2Q9UHG0 476 aa17.75■□□□□ 0.43
TRAPPC3-204ENST00000373166 DLX3O60479 287 aa17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 ZFAND5O76080 213 aa17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 SUPT7LO94864 414 aa17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 SEMA3DO95025 777 aa17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 PPP2R1BP30154 601 aa17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 TLX1P31314 330 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 CDH13P55290 713 aa17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 DLX5P56178 289 aa17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 VSNL1P62760 191 aa17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 TNFRSF17Q02223 184 aa17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 CLCQ05315 142 aa17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 FOXD4Q12950 439 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 SERTAD2Q14140 314 aa17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 ELAVL1Q15717 326 aaKnown RBP17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 CYP20A1Q6UW02 462 aa17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 ARSKQ6UWY0 536 aa17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 RPS27LQ71UM5 84 aaKnown RBP17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 GPR180Q86V85 440 aa17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 C7orf57Q8NEG2 295 aa17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 EPS8L3Q8TE67 593 aaKnown RBP17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 TMEM237Q96Q45 408 aa17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 SMC6Q96SB8 1091 aa17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 TRPS1Q9UHF7 1281 aa17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 SNX6Q9UNH7 406 aa17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 PPIEQ9UNP9 301 aaKnown RBP17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 STK38LQ9Y2H1 464 aa17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 CLDN16Q9Y5I7 305 aa17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 DNHD1Q96M86 4753 aa17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 HCFC1P51610 2035 aa17.74■□□□□ 0.43
TRAPPC3-204ENST00000373166 INTS1Q8N201 2190 aaKnown RBP17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 A0A1W2PPM1 405 aa17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 PINLYPA6NC86 204 aa17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 CDH16O75309 829 aa17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 ETHE1O95571 254 aa17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 GLI4P10075 376 aa17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 FOSL1P15407 271 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms