RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 IFT27Q9BW83 186 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 ACTRT3Q9BYD9 372 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 SLC6A16Q9GZN6 736 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 RACGAP1Q9H0H5 632 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF385DQ9H6B1 395 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 SOX17Q9H6I2 414 aaPredicted RBP5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 CTPS2Q9NRF8 586 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 PRTFDC1Q9NRG1 225 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 ACTR10Q9NZ32 417 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 POLR1DQ9Y2S0 133 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 MED31Q9Y3C7 131 aa5.06□□□□□ -1.6
SMNDC1-202ENST00000369603 FUOMA2VDF0 154 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 EFCAB9A8MZ26 197 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 ANHXE9PGG2 379 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 H3BQ06 376 aaPredicted RBP5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 SCN2BO60939 215 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 CCNKO75909 580 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 HLA-DQA2P01906 255 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 ENDOUP21128 410 aaKnown RBP5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 BMP8BP34820 402 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 CD97P48960 835 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 NRG3P56975 720 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 CLDN2P57739 230 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 COX10Q12887 443 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 EXOC3L2Q2M3D2 409 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 INAVAQ3KP66 663 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 LRIF1Q5T3J3 769 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 THOC7Q6I9Y2 204 aaKnown RBP5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 TMEM107Q6UX40 140 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF550Q7Z398 422 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 BMP8AQ7Z5Y6 402 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 OAFQ86UD1 273 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 CACTIN-AS1Q8N1I8 211 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 SP7Q8TDD2 431 aaPredicted RBP5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 ZDHHC1Q8WTX9 485 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 CHFRQ96EP1 664 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 IL4I1Q96RQ9 567 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 G6PC3Q9BUM1 346 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 POLR2J2Q9GZM3 115 aaKnown RBP5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 KCNN2Q9H2S1 579 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF576Q9H609 170 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 SPATA6Q9NWH7 488 aaPredicted RBP5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 PCDHGB7Q9Y5F8 929 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 F5P12259 2224 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 CROCCQ5TZA2 2017 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 LRRC37A2A6NM11 1700 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 A0A0J9YY10 115 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 XKRYO14609 159 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 CASC3O15234 703 aaKnown RBP5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 B4GALT2O60909 372 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 SMIM18P0DKX4 95 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 GPX2P18283 190 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 PRPH2P23942 346 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 IGFALSP35858 605 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 TSFMP43897 325 aaKnown RBP5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 C1orf61Q13536 156 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 KEAP1Q14145 624 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 LAPTM4AQ15012 233 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 UGT8Q16880 541 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 PRSS36Q5K4E3 855 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 RPL13AP3Q6NVV1 102 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 PARM1Q6UWI2 310 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 SLC29A4Q7RTT9 530 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 SPRED1Q7Z699 444 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 OR8J1Q8NGP2 316 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 OR52P1PQ8NH57 321 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 MAL2Q969L2 176 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 CIDECQ96AQ7 238 aaPredicted RBP5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 MS4A4EQ96PG1 132 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF300Q96RE9 604 aaPredicted RBP5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 CD180Q99467 661 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 FEVQ99581 238 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 CHCHD6Q9BRQ6 235 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 MS4A8Q9BY19 250 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 MTHFD2LQ9H903 347 aaPredicted RBP5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 LMAN1LQ9HAT1 526 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 AMBNQ9NP70 447 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 TNFRSF12AQ9NP84 129 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 CASP8AP2Q9UKL3 1982 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 ELOA3DA6NLF2 546 aaPredicted RBP5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 CHURC1-FNTBB4DL54 471 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 MCIDASD6RGH6 385 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 SCDO00767 359 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 CASKO14936 926 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 NDUFB5O43674 189 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 DUX1O43812 170 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 REM1O75628 298 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 CTSLP07711 333 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 CHRM5P08912 532 aaPredicted RBP5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 FURINP09958 794 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 PRR35P0CG20 571 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 ELK4P28324 431 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 TEAD1P28347 426 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 CD6P30203 668 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 CRISP1P54107 249 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 HBA1P69905 142 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 MC1RQ01726 317 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 DNASE1L3Q13609 305 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 SELPLGQ14242 412 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 GRM7Q14831 915 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms