RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 ENPP4Q9Y6X5 453 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 SNRNP200O75643 2136 aaKnown RBP13.07□□□□□ -0.32
SHC1-202ENST00000368445 JRKO75564 520 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 MAOBP27338 520 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 ENTPD1P49961 510 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 ST13P50502 369 aaKnown RBP13.07□□□□□ -0.32
SHC1-202ENST00000368445 C21orf58P58505 322 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 ABATP80404 500 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 EMX1Q04741 257 aaPredicted RBP13.07□□□□□ -0.32
SHC1-202ENST00000368445 ATAD3BQ5T9A4 648 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 LSRQ86X29 649 aaPredicted RBP13.07□□□□□ -0.32
SHC1-202ENST00000368445 C3orf14Q9HBI5 128 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 SELENONQ9NZV5 590 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 APOBEC3BQ9UH17 382 aaKnown RBP13.07□□□□□ -0.32
SHC1-202ENST00000368445 HCN4Q9Y3Q4 1203 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 UGT2B17O75795 530 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 C21orf33P30042 268 aaPredicted RBP13.07□□□□□ -0.32
SHC1-202ENST00000368445 SERPINB1P30740 379 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 AVPR1BP47901 424 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 CRISP3P54108 245 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 HOXC5Q00444 222 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 UBXN2BQ14CS0 331 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 TMEM35AQ53FP2 167 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 C6orf132Q5T0Z8 1188 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 BHLHB9Q6PI77 547 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 ASPGQ86U10 573 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 CREB3L4Q8TEY5 395 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 NEURL3Q96EH8 262 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 RNF31Q96EP0 1072 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 GABRG3Q99928 467 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 MENTQ9BUN1 341 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 FUNDC2Q9BWH2 189 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 DDX31Q9H8H2 851 aaKnown RBP13.07□□□□□ -0.32
SHC1-202ENST00000368445 OR6C2Q9NZP2 312 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 PADI2Q9Y2J8 665 aa13.07□□□□□ -0.32
SHC1-202ENST00000368445 LOC100506127A0A0U1RQW1 187 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 ZNF99A8MXY4 864 aaPredicted RBP13.06□□□□□ -0.32
SHC1-202ENST00000368445 SLC16A6O15403 523 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 PCDHGA12O60330 932 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 F3P13726 295 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 NDUFS1P28331 727 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 TLX1P31314 330 aaPredicted RBP13.06□□□□□ -0.32
SHC1-202ENST00000368445 XKP51811 444 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 PRR5P85299 388 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 MICAQ29983 383 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 TSPYL5Q86VY4 417 aaPredicted RBP13.06□□□□□ -0.32
SHC1-202ENST00000368445 GOT1L1Q8NHS2 421 aaPredicted RBP13.06□□□□□ -0.32
SHC1-202ENST00000368445 NCSTNQ92542 709 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 TMEM38AQ9H6F2 299 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 NMNAT1Q9HAN9 279 aaPredicted RBP13.06□□□□□ -0.32
SHC1-202ENST00000368445 CA14Q9ULX7 337 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 SLC9A8Q9Y2E8 581 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 ZNF106Q9H2Y7 1883 aaKnown RBP13.06□□□□□ -0.32
SHC1-202ENST00000368445 HMGN4O00479 90 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 DRD2P14416 443 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 KRT20P35900 424 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 LTBRP36941 435 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 ANXA11P50995 505 aaKnown RBP13.06□□□□□ -0.32
SHC1-202ENST00000368445 KCNC4Q03721 635 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 DCTN2Q13561 401 aaKnown RBP13.06□□□□□ -0.32
SHC1-202ENST00000368445 ENPP2Q13822 863 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 E2F2Q14209 437 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 MAD2L1BPQ15013 274 aaPredicted RBP13.06□□□□□ -0.32
SHC1-202ENST00000368445 FIGLAQ6QHK4 219 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 SLC22A18Q96BI1 424 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 EPYCQ99645 322 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 YIPF2Q9BWQ6 316 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 POLMQ9NP87 494 aaPredicted RBP13.06□□□□□ -0.32
SHC1-202ENST00000368445 PAK1IP1Q9NWT1 392 aaPredicted RBP13.06□□□□□ -0.32
SHC1-202ENST00000368445 ANKMY1Q9P2S6 941 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 PCDHGA4Q9Y5G9 962 aa13.06□□□□□ -0.32
SHC1-202ENST00000368445 TRBV4-1A0A0J9YWV2 114 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 TNFP01375 233 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 LCKP06239 509 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 THEGLP0DJG4 465 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 NR2F6P10588 404 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 GABRG2P18507 467 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 CDC42P60953 191 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 DMPKQ09013 629 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 ALG11Q2TAA5 492 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 TMEM184AQ6ZMB5 413 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 PARGQ86W56 976 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 ABCA7Q8IZY2 2146 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 NUP43Q8NFH3 380 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 CNRIP1Q96F85 164 aaPredicted RBP13.05□□□□□ -0.32
SHC1-202ENST00000368445 CHST8Q9H2A9 424 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 MKLN1Q9UL63 735 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 SCML1Q9UN30 329 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 C4orf51C9J302 202 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 LDB3O75112 727 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 GASTP01350 101 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 H1F0P07305 194 aaKnown RBP13.05□□□□□ -0.32
SHC1-202ENST00000368445 NT5EP21589 574 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 GSTM2P28161 218 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 PEBP1P30086 187 aaKnown RBP13.05□□□□□ -0.32
SHC1-202ENST00000368445 VSX2P58304 361 aaPredicted RBP13.05□□□□□ -0.32
SHC1-202ENST00000368445 IL18R1Q13478 541 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 NECTIN4Q96NY8 510 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 KIR3DX1Q9H7L2 352 aa13.05□□□□□ -0.32
SHC1-202ENST00000368445 IL21RQ9HBE5 538 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms