RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.7□□□□□ -0.54
PTPN7-202ENST00000367279 HNRNPA0Q13151 305 aaKnown RBP11.7□□□□□ -0.54
PTPN7-202ENST00000367279 CLEC12AQ5QGZ9 265 aa11.7□□□□□ -0.54
PTPN7-202ENST00000367279 ZNF362Q5T0B9 420 aaPredicted RBP11.7□□□□□ -0.54
PTPN7-202ENST00000367279 NXNL2Q5VZ03 156 aa11.7□□□□□ -0.54
PTPN7-202ENST00000367279 LILRA6Q6PI73 481 aa11.7□□□□□ -0.54
PTPN7-202ENST00000367279 AMER3Q8N944 861 aa11.7□□□□□ -0.54
PTPN7-202ENST00000367279 OR5P2Q8WZ92 322 aa11.7□□□□□ -0.54
PTPN7-202ENST00000367279 NXPE3Q969Y0 559 aa11.7□□□□□ -0.54
PTPN7-202ENST00000367279 PDXPQ96GD0 296 aa11.7□□□□□ -0.54
PTPN7-202ENST00000367279 BBS4Q96RK4 519 aa11.7□□□□□ -0.54
PTPN7-202ENST00000367279 MND1Q9BWT6 205 aa11.7□□□□□ -0.54
PTPN7-202ENST00000367279 NXF2Q9GZY0 626 aaKnown RBP11.7□□□□□ -0.54
PTPN7-202ENST00000367279 QRSL1Q9H0R6 528 aaKnown RBP11.7□□□□□ -0.54
PTPN7-202ENST00000367279 XKR8Q9H6D3 395 aa11.7□□□□□ -0.54
PTPN7-202ENST00000367279 MGAT4BQ9UQ53 548 aa11.7□□□□□ -0.54
PTPN7-202ENST00000367279 YARS2Q9Y2Z4 477 aaKnown RBP11.7□□□□□ -0.54
PTPN7-202ENST00000367279 PRKYO43930 277 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 TMCC2O75069 709 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 SEMA7AO75326 666 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 PDE9AO76083 593 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 SOD1P00441 154 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 CSF2P04141 144 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 CYP17A1P05093 508 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 LIMS1P48059 325 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 PXNP49023 591 aaPredicted RBP11.69□□□□□ -0.54
PTPN7-202ENST00000367279 HMGA2P52926 109 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 GPAT3Q53EU6 434 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 PODNL1Q6PEZ8 512 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 CCDC190Q86UF4 302 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 AMZ2Q86W34 360 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 ANKRD53Q8N9V6 530 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 MTERF3Q96E29 417 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 SLC35G5Q96KT7 338 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 LRR1Q96L50 414 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 TEFMQ96QE5 360 aaKnown RBP11.69□□□□□ -0.54
PTPN7-202ENST00000367279 TREX2Q9BQ50 279 aaPredicted RBP11.69□□□□□ -0.54
PTPN7-202ENST00000367279 BARHL1Q9BZE3 327 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 MMP28Q9H239 520 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 FBXL12Q9NXK8 326 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 A3GALT2U3KPV4 340 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 ABHD14A-ACY1A0A1B0GW23 586 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 ANTXRLA6NF34 631 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 RFXAPO00287 272 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 HMGN4O00479 90 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 PLD2O14939 933 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 CAPN5O15484 640 aaPredicted RBP11.69□□□□□ -0.54
PTPN7-202ENST00000367279 FRS3O43559 492 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 CH25HO95992 272 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 PRNPP04156 253 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 SCG5P05408 212 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 KELP23276 732 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 PPP2R1BP30154 601 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 OPRD1P41143 372 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 VIPR2P41587 438 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 SLC6A11P48066 632 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 CAV3P56539 151 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 MAP4K2Q12851 820 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 OR2G6Q5TZ20 316 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 PGBD2Q6P3X8 592 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 UNC5DQ6UXZ4 953 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 SFTPA1Q8IWL2 248 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 NEURL3Q96EH8 262 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 ZNF486Q96H40 463 aaPredicted RBP11.69□□□□□ -0.54
PTPN7-202ENST00000367279 DIRAS2Q96HU8 199 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 BEX2Q9BXY8 128 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 HOXD1Q9GZZ0 328 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 REV1Q9UBZ9 1251 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 SLC23A2Q9UGH3 650 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 ALPK3Q96L96 1907 aa11.69□□□□□ -0.54
PTPN7-202ENST00000367279 DENND4CQ5VZ89 1909 aa11.68□□□□□ -0.54
PTPN7-202ENST00000367279 FAAHO00519 579 aa11.68□□□□□ -0.54
PTPN7-202ENST00000367279 TMPRSS11DO60235 418 aa11.68□□□□□ -0.54
PTPN7-202ENST00000367279 HBQ1P09105 142 aa11.68□□□□□ -0.54
PTPN7-202ENST00000367279 ADH5P11766 374 aa11.68□□□□□ -0.54
PTPN7-202ENST00000367279 MYL12AP19105 171 aa11.68□□□□□ -0.54
PTPN7-202ENST00000367279 ELOAQ14241 798 aaKnown RBP11.68□□□□□ -0.54
PTPN7-202ENST00000367279 KRT33BQ14525 404 aa11.68□□□□□ -0.54
PTPN7-202ENST00000367279 BAK1Q16611 211 aa11.68□□□□□ -0.54
PTPN7-202ENST00000367279 ZNF517Q6ZMY9 492 aaPredicted RBP11.68□□□□□ -0.54
PTPN7-202ENST00000367279 ZNF557Q8N988 423 aaPredicted RBP11.68□□□□□ -0.54
PTPN7-202ENST00000367279 CXorf40AQ8TE69 158 aa11.68□□□□□ -0.54
PTPN7-202ENST00000367279 UBASH3BQ8TF42 649 aa11.68□□□□□ -0.54
PTPN7-202ENST00000367279 GATAD2BQ8WXI9 593 aa11.68□□□□□ -0.54
PTPN7-202ENST00000367279 SLC9A6Q92581 669 aa11.68□□□□□ -0.54
PTPN7-202ENST00000367279 ZBED6CLQ96FA7 236 aaPredicted RBP11.68□□□□□ -0.54
PTPN7-202ENST00000367279 COQ10AQ96MF6 247 aa11.68□□□□□ -0.54
PTPN7-202ENST00000367279 TRMT61BQ9BVS5 477 aaKnown RBP11.68□□□□□ -0.54
PTPN7-202ENST00000367279 SYNDIG1LA6NDD5 238 aa11.68□□□□□ -0.54
PTPN7-202ENST00000367279 B4GALT2O60909 372 aa11.68□□□□□ -0.54
PTPN7-202ENST00000367279 FKTNO75072 461 aa11.68□□□□□ -0.54
PTPN7-202ENST00000367279 WASP42768 502 aa11.68□□□□□ -0.54
PTPN7-202ENST00000367279 CLCNKAP51800 687 aa11.68□□□□□ -0.54
PTPN7-202ENST00000367279 NCBP2P52298 156 aaKnown RBP eCLIP11.68□□□□□ -0.54
PTPN7-202ENST00000367279 LASP1Q14847 261 aaKnown RBP11.68□□□□□ -0.54
PTPN7-202ENST00000367279 ZNF750Q32MQ0 723 aa11.68□□□□□ -0.54
PTPN7-202ENST00000367279 PYDC2Q56P42 97 aa11.68□□□□□ -0.54
PTPN7-202ENST00000367279 PDZK1Q5T2W1 519 aa11.68□□□□□ -0.54
PTPN7-202ENST00000367279 AGAP6Q5VW22 663 aa11.68□□□□□ -0.54
PTPN7-202ENST00000367279 SAXO2Q658L1 398 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms