RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 VRK3Q8IV63 474 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 OR6N1Q8NGY5 312 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 SLC22A8Q8TCC7 542 aa13.19□□□□□ -0.3
CTR9-201ENST00000361367 HIST1H1TP22492 207 aaPredicted RBP13.18□□□□□ -0.3
CTR9-201ENST00000361367 ARNTP27540 789 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 SLC6A6P31641 620 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 XCR1P46094 333 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 TAB1Q15750 504 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 ZSWIM7Q19AV6 140 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 GFOD2Q3B7J2 385 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 CES4AQ5XG92 561 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 MZT2BQ6NZ67 158 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 SBSNQ6UWP8 590 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 MAL2Q969L2 176 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 TMCO6Q96DC7 493 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 LYSMD1Q96S90 227 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 ARHGAP9Q9BRR9 750 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 TNFRSF10DQ9UBN6 386 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 NME4O00746 187 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 HSD17B1P14061 328 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 SHQ1Q6PI26 577 aaKnown RBP13.18□□□□□ -0.3
CTR9-201ENST00000361367 TRAF7Q6Q0C0 670 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 CIDECQ96AQ7 238 aaPredicted RBP13.18□□□□□ -0.3
CTR9-201ENST00000361367 FAM129BQ96TA1 746 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 PIP5K1AQ99755 562 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 ACTRT3Q9BYD9 372 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 TOR3AQ9H497 397 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 FGF22Q9HCT0 170 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 MBNL1Q9NR56 388 aaKnown RBP13.18□□□□□ -0.3
CTR9-201ENST00000361367 TMEM45AQ9NWC5 275 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 PPP4R1LQ9P1A2 415 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 NAALAD2Q9Y3Q0 740 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 ANTXRLA6NF34 631 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 PRAMEF2O60811 474 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 SNX4O95219 450 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 CBLP22681 906 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 MNDAP41218 407 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 TLR1Q15399 786 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 NPTX1Q15818 432 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 ATP6AP1Q15904 470 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 CRTC2Q53ET0 693 aaPredicted RBP13.18□□□□□ -0.3
CTR9-201ENST00000361367 KIAA1614Q5VZ46 1190 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 RNF175Q8N4F7 328 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 UFD1Q92890 307 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 EGLN2Q96KS0 407 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 TM7SF3Q9NS93 570 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 CLEC4AQ9UMR7 237 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 HS3ST3A1Q9Y663 406 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 KNTC1P50748 2209 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 A0A1B0GVT2 93 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 C2CD4DB7Z1M9 353 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 I6L893 689 aaPredicted RBP13.18□□□□□ -0.3
CTR9-201ENST00000361367 K7ESM1 405 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 MC3RP41968 323 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 EMP2P54851 167 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 CDH11P55287 796 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 SLC35F1Q5T1Q4 408 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 S100ZQ8WXG8 99 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 VN1R3Q9BXE9 311 aa13.18□□□□□ -0.3
CTR9-201ENST00000361367 KAT8Q9H7Z6 458 aaKnown RBP13.18□□□□□ -0.3
CTR9-201ENST00000361367 NDUFV2P19404 249 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 GPX3P22352 226 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 AHRP35869 848 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 BCL7AQ4VC05 210 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 TRIM61Q5EBN2 209 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 PERM1Q5SV97 790 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 TPRG1LQ5T0D9 272 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 RNF220Q5VTB9 566 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 FAM69BQ5VUD6 431 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 NAGSQ8N159 534 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 UBASH3BQ8TF42 649 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 OSTF1Q92882 214 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 CMKLR1Q99788 373 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 FOXQ1Q9C009 403 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 C6orf106Q9H6K1 298 aaPredicted RBP13.17□□□□□ -0.3
CTR9-201ENST00000361367 MYNNQ9NPC7 610 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 BTNL2Q9UIR0 455 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 SLCO2B1O94956 709 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 PPP3R1P63098 170 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 TXNL4AP83876 142 aaKnown RBP13.17□□□□□ -0.3
CTR9-201ENST00000361367 RBM48Q5RL73 367 aaKnown RBP13.17□□□□□ -0.3
CTR9-201ENST00000361367 SLC44A3Q8N4M1 653 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 OR9A2Q8NGT5 310 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 C9orf43Q8TAL5 461 aaPredicted RBP13.17□□□□□ -0.3
CTR9-201ENST00000361367 TANKQ92844 425 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 PDXPQ96GD0 296 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 DBIP07108 87 aaKnown RBP13.17□□□□□ -0.3
CTR9-201ENST00000361367 PAX7P23759 505 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 ITGA3P26006 1051 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 MXD1Q05195 221 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 RGNQ15493 299 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 C5orf22Q49AR2 442 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 VWA5B2Q8N398 1253 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 KLHL36Q8N4N3 616 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 TCEANCQ8N8B7 351 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 CDRT4Q8N9R6 151 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 MS4A4EQ96PG1 132 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 PCDHGB1Q9Y5G3 927 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 GPR45Q9Y5Y3 372 aa13.17□□□□□ -0.3
CTR9-201ENST00000361367 POC5Q8NA72 575 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms