RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 SEC16AO15027 2179 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 BRWD1Q9NSI6 2320 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 AMY2BP19961 511 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 BDKRB2P30411 391 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 TAS2R31P59538 309 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 GRIK5Q16478 980 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 RAB41Q5JT25 222 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 MMP28Q9H239 520 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 PRKYO43930 277 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 LILRB5O75023 590 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 ZNF136P52737 540 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 GRIN2CQ14957 1233 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 DUSP28Q4G0W2 176 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 CYBRD1Q53TN4 286 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 C6orf89Q6UWU4 347 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 TRAM1L1Q8N609 369 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 MYLIPQ8WY64 445 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 SOX17Q9H6I2 414 aaPredicted RBP12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 CD84Q9UIB8 345 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 ERCC6L2Q5T890 1561 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 RAB6AP20340 208 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 CDK3Q00526 305 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 CAMK2DQ13557 499 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 PLGLAQ15195 96 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 OR9I1Q8NGQ6 314 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 MAPK15Q8TD08 544 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 SRA1Q9HD15 236 aaKnown RBP12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 ARHGEF17Q96PE2 2063 aaPredicted RBP12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 SPTBP11277 2137 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 TCRBV5S4A2TA0A5A2 114 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 ATP6V1G2-DDX39BF2Z307 99 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 ZNF821O75541 412 aaPredicted RBP12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 KCNAB2Q13303 367 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 TIGD3Q6B0B8 471 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 TLDC1Q6P9B6 456 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 RDH10Q8IZV5 341 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 DCUN1D4Q92564 292 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 MYRFLQ96LU7 910 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 FAM221BA6H8Z2 402 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 MMP3P08254 477 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 C7P10643 843 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 PRKCAP17252 672 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 PTH2RP49190 550 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 GDF10P55107 478 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 HTD2P86397 168 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 HMGCS1Q01581 520 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 GSTM4Q03013 218 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 OR4F3Q6IEY1 312 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 TMEM205Q6UW68 189 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 GLYATL2Q8WU03 294 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 FAM163AQ96GL9 167 aaPredicted RBP12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 UBXN10Q96LJ8 280 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 FAM83CQ9BQN1 747 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 FAM120CQ9NX05 1096 aaKnown RBP12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 CNTN3Q9P232 1028 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 UTS2RQ9UKP6 389 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 TEX51A0A1B0GUA7 166 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 SLC31A1O15431 190 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 ALDOBP05062 364 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 JUNDP17535 347 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 RNF4P78317 190 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 ANKRD26Q9UPS8 1709 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 OR5K4A6NMS3 321 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 F5H5P2 479 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 CDC7O00311 574 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 FUT10Q6P4F1 479 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 ZNF619Q8N2I2 560 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 SUMF2Q8NBJ7 301 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 OR51G2Q8NGK0 314 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 TGIF2Q9GZN2 237 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 MGAT4BQ9UQ53 548 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 MIA3Q5JRA6 1907 aa12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 TARBP1Q13395 1621 aaKnown RBP12.69□□□□□ -0.38
SRGAP3-201ENST00000360413 VGLL4Q14135 290 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 LANCL3Q6ZV70 420 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 GDPD1Q8N9F7 314 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 SMPDL3AQ92484 453 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 SLC25A44Q96H78 314 aaPredicted RBP12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 ZNF419Q96HQ0 510 aaPredicted RBP12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 PRDM9Q9NQV7 894 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 CDK6Q00534 326 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 RABL3Q5HYI8 236 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 ZNF776Q68DI1 518 aaPredicted RBP12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 TMEM225Q6GV28 225 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 ZNF705AQ6ZN79 300 aaPredicted RBP12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 HNRNPABQ99729 332 aaKnown RBP12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 ATG4BQ9Y4P1 393 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 HES2Q9Y543 173 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 FMN2Q9NZ56 1722 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 A0A087WUU8 490 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 KLF11O14901 512 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 LRRTM2O43300 516 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 PAQR8Q8TEZ7 354 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 PTPRZ1P23471 2315 aaPredicted RBP12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 HTRA4P83105 476 aaPredicted RBP12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 PRKCZQ05513 592 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 COQ5Q5HYK3 327 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 PDE7BQ9NP56 450 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 ADAP2Q9NPF8 381 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms