RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 PCED1BQ96HM7 432 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 K7EPK0 472 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 CNTN5O94779 1100 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 CNOT4O95628 575 aaKnown RBP8.92□□□□□ -0.98
VPS13A-203ENST00000360280 RHCEP18577 417 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 MSX1P28360 303 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 FAM122CQ6P4D5 195 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 FAM71E2Q8N5Q1 922 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 LGALS12Q96DT0 336 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 KREMEN1Q96MU8 473 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 CDC6Q99741 560 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 NAALAD2Q9Y3Q0 740 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 NUBP2Q9Y5Y2 271 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 JCADQ9P266 1359 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 ADAM10O14672 748 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 KCNJ11Q14654 390 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 KDELC1Q6UW63 502 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 TSPEARQ8WU66 669 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 SLCO2A1Q92959 643 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 DAZAP1Q96EP5 407 aaKnown RBP8.92□□□□□ -0.98
VPS13A-203ENST00000360280 SLC19A3Q9BZV2 496 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 SLC22A14Q9Y267 594 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 FOXO6A8MYZ6 492 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 CREB1P16220 341 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 HNRNPFP52597 415 aaKnown RBP8.92□□□□□ -0.98
VPS13A-203ENST00000360280 ARHGAP19Q14CB8 494 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 TMEM151AQ8N4L1 468 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 B4GALT7Q9UBV7 327 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 PCDHGA6Q9Y5G7 932 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 CCL16O15467 120 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 SYNGR4O95473 234 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 RETP07949 1114 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 DPEP1P16444 411 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 PGAM5Q96HS1 289 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 FCF1Q9Y324 198 aaKnown RBP8.92□□□□□ -0.98
VPS13A-203ENST00000360280 LYRM1O43325 122 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 TXNL1O43396 289 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 GCDHQ92947 438 aaPredicted RBP8.92□□□□□ -0.98
VPS13A-203ENST00000360280 TMEM74Q96NL1 305 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 MGLLQ99685 303 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 HIPK2Q9H2X6 1198 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 SIX4Q9UIU6 781 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 PCDHGA5Q9Y5G8 931 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 P2RX6O15547 441 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 C6P13671 934 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 BPIP17213 487 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 TMEM35AQ53FP2 167 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 MPP7Q5T2T1 576 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 ENDOVQ8N8Q3 282 aaKnown RBP8.92□□□□□ -0.98
VPS13A-203ENST00000360280 OR1S1Q8NH92 325 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 BSCL2Q96G97 398 aaPredicted RBP8.92□□□□□ -0.98
VPS13A-203ENST00000360280 SLC45A3Q96JT2 553 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 RNF19AQ9NV58 838 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 ZNF223Q9UK11 482 aaPredicted RBP8.92□□□□□ -0.98
VPS13A-203ENST00000360280 A0A096LPI6 279 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 hCG_1807616A0A1W2PRN6 198 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 MMP3P08254 477 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 TFPTP0C1Z6 253 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 IL32P24001 234 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 TRIM23P36406 574 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 PPA1Q15181 289 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 KIAA0319Q5VV43 1072 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 LURAP1Q96LR2 239 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 SLC25A31Q9H0C2 315 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 ZNF30P17039 623 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 PRPH2P23942 346 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 RPS27AP62979 156 aaKnown RBP8.92□□□□□ -0.98
VPS13A-203ENST00000360280 UBA52P62987 128 aaKnown RBP8.92□□□□□ -0.98
VPS13A-203ENST00000360280 NKX3-2P78367 333 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 HABP2Q14520 560 aaPredicted RBP8.92□□□□□ -0.98
VPS13A-203ENST00000360280 ANKK1Q8NFD2 765 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 MUS81Q96NY9 551 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 CD244Q9BZW8 370 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 MEAF6Q9HAF1 191 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 ZDHHC2Q9UIJ5 367 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 GJE1A6NN92 205 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 UBFD1O14562 309 aaKnown RBP8.92□□□□□ -0.98
VPS13A-203ENST00000360280 UPK1BO75841 260 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 ATP1B2P14415 290 aaPredicted RBP8.92□□□□□ -0.98
VPS13A-203ENST00000360280 MAGEB1P43366 347 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 RNF4P78317 190 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 SIRPB2Q5JXA9 342 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 SLC18B1Q6NT16 456 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 PAQR3Q6TCH7 311 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 PURBQ96QR8 312 aaKnown RBP8.92□□□□□ -0.98
VPS13A-203ENST00000360280 DOHHQ9BU89 302 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 UBIAD1Q9Y5Z9 338 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 FAM208AQ9UK61 1670 aaKnown RBP8.92□□□□□ -0.98
VPS13A-203ENST00000360280 RAB30Q15771 203 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 AGAP7PQ5VUJ5 663 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 AGAP6Q5VW22 663 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 TMIGD1Q6UXZ0 262 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 NRROSQ86YC3 692 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 AGAP4Q96P64 663 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 P2RX7Q99572 595 aaKnown RBP8.92□□□□□ -0.98
VPS13A-203ENST00000360280 UNC119BA6NIH7 251 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 TP53I11O14683 189 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 BEST1O76090 585 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 GRIK5Q16478 980 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 TMEM198Q66K66 360 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms