RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 FLRT2O43155 660 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 EMC8O43402 210 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 ERAL1O75616 437 aaKnown RBP12.72□□□□□ -0.37
CCDC197-201ENST00000359253 PDE9AO76083 593 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 NSA2O95478 260 aaKnown RBP12.72□□□□□ -0.37
CCDC197-201ENST00000359253 STATHP02808 62 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 CEACAM1P13688 526 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 EFNA1P20827 205 aaPredicted RBP12.72□□□□□ -0.37
CCDC197-201ENST00000359253 PEX2P28328 305 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 AVPR1BP47901 424 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 GABRA4P48169 554 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 ARL4DP49703 201 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 CDK6Q00534 326 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 HSPB3Q12988 150 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 GRM7Q14831 915 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 MYBPC3Q14896 1274 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 RSPO4Q2I0M5 234 aaPredicted RBP12.72□□□□□ -0.37
CCDC197-201ENST00000359253 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.72□□□□□ -0.37
CCDC197-201ENST00000359253 CRB2Q5IJ48 1285 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 LPCAT4Q643R3 524 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 C18orf63Q68DL7 685 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 PPP4R4Q6NUP7 873 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 IZUMO2Q6UXV1 221 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 PIP4P1Q86T03 277 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 RNF130Q86XS8 419 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 C10orf111Q8N326 155 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 LRRC25Q8N386 305 aaPredicted RBP12.72□□□□□ -0.37
CCDC197-201ENST00000359253 TTC29Q8NA56 475 aaPredicted RBP12.72□□□□□ -0.37
CCDC197-201ENST00000359253 RASSF5Q8WWW0 418 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 KLHL6Q8WZ60 621 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 LZICQ8WZA0 190 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 N4BP2L2Q92802 583 aaPredicted RBP12.72□□□□□ -0.37
CCDC197-201ENST00000359253 MVB12AQ96EY5 273 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 NAF1Q96HR8 494 aaKnown RBP12.72□□□□□ -0.37
CCDC197-201ENST00000359253 SEPHS2Q99611 448 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 OSBPL10Q9BXB5 764 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 FSCN3Q9NQT6 498 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 SOHLH2Q9NX45 425 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 NTMQ9P121 344 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 DNAJB9Q9UBS3 223 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 NAALAD2Q9Y3Q0 740 aa12.72□□□□□ -0.37
CCDC197-201ENST00000359253 SNRNP200O75643 2136 aaKnown RBP12.71□□□□□ -0.37
CCDC197-201ENST00000359253 SUV39H1O43463 412 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 B4GAT1O43505 415 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 ASNA1O43681 348 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 SH3BP5O60239 455 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 DPM1O60762 260 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 PRAMEF10O60809 474 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 PRKD3O94806 890 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 PRSS23O95084 383 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 AGR2O95994 175 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 ETFAP13804 333 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 PORP16435 677 aaPredicted RBP12.71□□□□□ -0.37
CCDC197-201ENST00000359253 GRK6P43250 576 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 MAGEA2P43356 314 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 DUSP3P51452 185 aaPredicted RBP12.71□□□□□ -0.37
CCDC197-201ENST00000359253 OR1D5P58170 312 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 EEF1A2Q05639 463 aaKnown RBP12.71□□□□□ -0.37
CCDC197-201ENST00000359253 TP53BP2Q13625 1128 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 SCARB2Q14108 478 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 PRAMEF8Q5VWM4 474 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 PRAMEF7Q5VXH5 474 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 REEP3Q6NUK4 255 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 TMEM71Q6P5X7 295 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 CEACAM20Q6UY09 585 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 MED25Q71SY5 747 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 CCDC116Q8IYX3 515 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 CA13Q8N1Q1 262 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 D2HGDHQ8N465 521 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 SUN3Q8TAQ9 357 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 FBXO30Q8TB52 745 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 PNPT1Q8TCS8 783 aaKnown RBP12.71□□□□□ -0.37
CCDC197-201ENST00000359253 CNRIP1Q96F85 164 aaPredicted RBP12.71□□□□□ -0.37
CCDC197-201ENST00000359253 SLC41A2Q96JW4 573 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 SLC35G5Q96KT7 338 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 CDC6Q99741 560 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 ZCCHC3Q9NUD5 404 aaKnown RBP12.71□□□□□ -0.37
CCDC197-201ENST00000359253 PTGFRNQ9P2B2 879 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 BAG5Q9UL15 447 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 RAB26Q9ULW5 256 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 MAP4K5Q9Y4K4 846 aa12.71□□□□□ -0.37
CCDC197-201ENST00000359253 TP53BP1Q12888 1972 aaPredicted RBP12.7□□□□□ -0.38
CCDC197-201ENST00000359253 CABIN1Q9Y6J0 2220 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 LAMA1P25391 3075 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 A0A087WV62 115 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 IGHV5-51A0A0C4DH38 117 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 HYKKA2RU49 373 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 EME2A4GXA9 379 aaPredicted RBP12.7□□□□□ -0.38
CCDC197-201ENST00000359253 SYNDIG1LA6NDD5 238 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 DUXAA6NLW8 204 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 C5orf58C9J3I9 102 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 CYR61O00622 381 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 GPR75O95800 540 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 RNH1P13489 461 aaKnown RBP12.7□□□□□ -0.38
CCDC197-201ENST00000359253 ZNF26P17031 533 aaPredicted RBP12.7□□□□□ -0.38
CCDC197-201ENST00000359253 CD1CP29017 333 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 KHKP50053 298 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 CDK9P50750 372 aaKnown RBP12.7□□□□□ -0.38
CCDC197-201ENST00000359253 CLCN2P51788 898 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 XKP51811 444 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms